PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g730910.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 692aa MW: 77389.1 Da PI: 9.7044

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g730910.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	62.8	5.5e-20	22	104	10	99
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + s+rl++p kf+++++ + + + l +sg +W+v+l + + ++ ++++GW++Fvk+++L++gD +vFk+dg+s+f +v+++++ Pd.00g730910.m01 22 DF-SQRLRIPPKFVKNFNVR-PLH-KCALSGPSGIRWTVEL--EERENGLFFQDGWQGFVKDHHLEDGDCLVFKYDGESKF--KVTIYDR 104 44.457******666544.454.899*********..********************************9999..8888886 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MARKLVKPSL NKQSFFKILL GDFSQRLRIP PKFVKNFNVR PLHKCALSGP SGIRWTVELE 60 ERENGLFFQD GWQGFVKDHH LEDGDCLVFK YDGESKFKVT IYDRTACEKN VKVAERSGCP 120 VSLANKGKAQ VKEEIVDRET RNYNKNCQNK AIVSGRSGNY VIPGRRPAND HVGATSTEPV 180 LFKPKYSCFI ITFTRKLRYG VSIPKEVAVT EGLLSKKSMM IQDPTGRSWP VKLRVRGKLS 240 SCRVNMSTVL STGFPKAILQ FYLDFGERVL HDADPSLRTF FRSCLSREFA DPVVAEATVD 300 FLNANKKKLL TSFPTLLPQF FPLMLKLIAW NGENFGGGIG EGRKELRMLL ALMDEAYTGS 360 TIGDGGGDSE SEDSSTIDVA DPLFFDLLKD ENDGLAERHW TSPGMAAALQ AAINTPQSDR 420 LKHILRMAPR FLDAYFSIAL RDVNNSLVCA LIPLLMSRNA TIFPDKIYSY EVRKRLLEFM 480 LAAFQRSPDF IALLKKPIMD RLGEAYDSPE KTELALQLCW AIGEHGGGGG SHKDEARELF 540 EGLELLLYEN LASSRLGLGQ ESVFSSDSQT SRKSSQSRLL CFVVTAIAKL ATNHRELLPR 600 ARVSLGKVAR SRISDVRVWR RARDYLGLMT EPAISLSVLG PSRPSHGQMQ NPGTVKWSDG 660 ATKMIAHVPF YILGGQGPPF HDFLFSDILP RR

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MARKLVKPSL NKQSFFKILL GDFSQRLRIP PKFVKNFNVR PLHKCALSGP SGIRWTVELE  60
ERENGLFFQD GWQGFVKDHH LEDGDCLVFK YDGESKFKVT IYDRTACEKN VKVAERSGCP  120
VSLANKGKAQ VKEEIVDRET RNYNKNCQNK AIVSGRSGNY VIPGRRPAND HVGATSTEPV  180
LFKPKYSCFI ITFTRKLRYG VSIPKEVAVT EGLLSKKSMM IQDPTGRSWP VKLRVRGKLS  240
SCRVNMSTVL STGFPKAILQ FYLDFGERVL HDADPSLRTF FRSCLSREFA DPVVAEATVD  300
FLNANKKKLL TSFPTLLPQF FPLMLKLIAW NGENFGGGIG EGRKELRMLL ALMDEAYTGS  360
TIGDGGGDSE SEDSSTIDVA DPLFFDLLKD ENDGLAERHW TSPGMAAALQ AAINTPQSDR  420
LKHILRMAPR FLDAYFSIAL RDVNNSLVCA LIPLLMSRNA TIFPDKIYSY EVRKRLLEFM  480
LAAFQRSPDF IALLKKPIMD RLGEAYDSPE KTELALQLCW AIGEHGGGGG SHKDEARELF  540
EGLELLLYEN LASSRLGLGQ ESVFSSDSQT SRKSSQSRLL CFVVTAIAKL ATNHRELLPR  600
ARVSLGKVAR SRISDVRVWR RARDYLGLMT EPAISLSVLG PSRPSHGQMQ NPGTVKWSDG  660
ATKMIAHVPF YILGGQGPPF HDFLFSDILP RR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	1e-18	B3 family protein