PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g730310.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 770aa    MW: 85710 Da    PI: 9.343
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g730310.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B362.66.4e-20221041099
                       HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        + s+rl++p kf+++++   + + +  l  +sg +W+v+l  + + ++ ++++GW++Fvk+++L++gD +vFk+dg+s+f  +v+++++
  Pd.00g730310.m01  22 DF-SQRLRIPPKFVKNFNVR-PLH-KCALSGPSGIRWTVEL--EERENGLFFQDGWQGFVKDHHLEDGDCLVFKYDGESKF--KVTIYDR 104
                       44.457********666544.454.899*************..**********************************9999..8888886 PP
2B334.53.7e-112012811698
                       EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       + +pk+ a + g+ +  +k ++++d++grsW vkl++  + +s+r+ +++G  + ++an++  gD+ +F++++ s +   v++fr
  Pd.00g730310.m01 201 VLIPKEVAVTEGLLS--KKSMMIQDPTGRSWPVKLRVrgKLSSCRVNMSTGLLDCCNANQIIPGDTAIFEFVKPSLA--QVHIFR 281
                       789999999998874..4569**************996666777799***********************9875555..777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 770 aa     Download sequence    
MARKLVKPSL NKQSFFKILL GDFSQRLRIP PKFVKNFNVR PLHKCALSGP SGIRWTVELE  60
ERENGLFFQD GWQGFVKDHH LEDGDCLVFK YDGESKFKVT IYDRTACEKN VKVAERSGCP  120
VSLANKGKAQ VKEEIVDRET RNYHKNCQNK AIVSGRSGNS VIPGRRPAND HVGATSTEPV  180
LFKPKYSCFI ITFTRKLRYG VLIPKEVAVT EGLLSKKSMM IQDPTGRSWP VKLRVRGKLS  240
SCRVNMSTGL LDCCNANQII PGDTAIFEFV KPSLAQVHIF RMGGNSVAIL QFYLDFGERV  300
LHDADPSLRT FFRSCLSREF ADPVVAEATV DFLNANKKKL LTSFPTLLPQ FFPLMLKLIA  360
WNGEKLEKSF MKVFPGLMSP GSFLPLFPSL VDLPILVVAL EKVEKSSGSL VGNSIASMQK  420
STAPEMLLAL MDEAYTGSTI GDGGGDSESE DSSTIDVADP LFFDLLKDEN DGIAERHWTS  480
PGMTAALQAA INTPQSDRLK HILRMAPQFL DVYFSIALRD VNNSLVCALI PLLMSRNATI  540
FPDKIYSYEV RKRLLEFMLA AFQRSPDFIA LLKKPIMDRL GEAYDSPEKT ELALQLCWAI  600
GEHGGGGGSH KDEARELFEG LELLLYENLA SSRLGLGQES VFSSDSQTSR KSSQSRLLCF  660
VVTAIAKLAT NHRELLPRAR VSLGKVARSR ISDVRVWRRA RDYLGLMTEP AISLSVLGPS  720
RPSHGQMQNP GTVKWSDGAT KMIAHVPFYI LGGQGPPFHD FLFSDILPRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.13e-21B3 family protein