PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g676400.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 739aa MW: 82351.2 Da PI: 9.6995

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g676400.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	62.7	6e-20	22	104	10	99
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + s+rl++p kf+++++ + + + l +sg +W+v+l + + ++ ++++GW++Fvk+++L++gD +vFk+dg+s+f +v+++++ Pd.00g676400.m01 22 DF-SQRLRIPPKFVKNFNVR-PLH-KCALSGPSGIRWTVEL--EERENGLFFQDGWQGFVKDHHLEDGDCLVFKYDGESKF--KVTIYDR 104 44.457******666544.454.899*********..********************************9999..8888886 PP

Sequence ? help Back to Top
Protein Sequence Length: 739 aa Download sequence
MARKLVKPSL NKQSFFKILL GDFSQRLRIP PKFVKNFNVR PLHKCALSGP SGIRWTVELE 60 ERENGLFFQD GWQGFVKDHH LEDGDCLVFK YDGESKFKVT IYDRTACEKN VKVAERSGCP 120 VSLANKGKAQ VKEEIVDRET RNYHKNCQNK AIVSGRSGNS VIPGRRPAND HVGATSTEPV 180 LFKPKYSCFI ITFTRKLRYG VLIPKEVAVT EGLLSKKSMM IQDPTGRSWP VKLRVRGKLS 240 SCRVNMSTVL STGFPKAILQ FYLDFGERVL HDADPSLRTF FRSCLSREFA DPVVAEATVD 300 FLNANKKKLL TSFPTLLPQF FPLMLKLIAW NGEKLEKSFM KVFPGLMSPG SFLPLFPSLV 360 DLPILVVALE KVEKSSGSLV GNSIASMQKS TAPEMLLALM DEAYTGSTIG DGGGDSESED 420 SSTIDVADPL FFDLLKDEND GLAERHWTSP GMAAALQAAI NTPQSDRLKH ILRMAPRFLD 480 AYFSIALRDV NNSLVCALIP LLMSRNATIF PDKIYSYEVR KRLLEFMLAA FQRSPDFIAL 540 LKKPIMDRLG EAYDSPEKTE LALQLCWAIG EHGGGGGSHK DEARELFEGL ELLLYENLAS 600 SRLGLGQESV FSSDSQTSRK SSQSRLLCFV VTAIAKLATN HRELLPRARV SLGKVARSRI 660 SDVRVWRRAR DYLGLMTEPA ISLSVLGPSR PSHGQMQNPG TVKWSDGATK MIAHVPFYIL 720 GGQGPPFHDF LFSDILPRR

Sequence ? help Back to Top

Protein Sequence Length: 739 aa Download sequence

MARKLVKPSL NKQSFFKILL GDFSQRLRIP PKFVKNFNVR PLHKCALSGP SGIRWTVELE  60
ERENGLFFQD GWQGFVKDHH LEDGDCLVFK YDGESKFKVT IYDRTACEKN VKVAERSGCP  120
VSLANKGKAQ VKEEIVDRET RNYHKNCQNK AIVSGRSGNS VIPGRRPAND HVGATSTEPV  180
LFKPKYSCFI ITFTRKLRYG VLIPKEVAVT EGLLSKKSMM IQDPTGRSWP VKLRVRGKLS  240
SCRVNMSTVL STGFPKAILQ FYLDFGERVL HDADPSLRTF FRSCLSREFA DPVVAEATVD  300
FLNANKKKLL TSFPTLLPQF FPLMLKLIAW NGEKLEKSFM KVFPGLMSPG SFLPLFPSLV  360
DLPILVVALE KVEKSSGSLV GNSIASMQKS TAPEMLLALM DEAYTGSTIG DGGGDSESED  420
SSTIDVADPL FFDLLKDEND GLAERHWTSP GMAAALQAAI NTPQSDRLKH ILRMAPRFLD  480
AYFSIALRDV NNSLVCALIP LLMSRNATIF PDKIYSYEVR KRLLEFMLAA FQRSPDFIAL  540
LKKPIMDRLG EAYDSPEKTE LALQLCWAIG EHGGGGGSHK DEARELFEGL ELLLYENLAS  600
SRLGLGQESV FSSDSQTSRK SSQSRLLCFV VTAIAKLATN HRELLPRARV SLGKVARSRI  660
SDVRVWRRAR DYLGLMTEPA ISLSVLGPSR PSHGQMQNPG TVKWSDGATK MIAHVPFYIL  720
GGQGPPFHDF LFSDILPRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	5e-19	B3 family protein