PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g666760.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 442aa MW: 50366.1 Da PI: 4.7468

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g666760.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	103.3	3.2e-32	58	196	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk....sg 81 lp+G++F+Ptd+e++++ L +k +++ ++++ + +++ +i+ ++P++Lp +vk++ + +fF+++ k+y+tg+rk+r+++ + Pd.00g666760.m01 58 LPKGVKFDPTDQEIIWH-LIAKSGAEDlkphpfIDEFIItVDDDeGICCSHPHKLP-SVKQDGSASHFFHRAIKAYNTGTRKRRKIHdgdgDV 148 799**********65.6566555554576554443333444336******.778888999**************988343344 PP NAM 82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tg++k+++ +g + g+kk++v+y r k++kt+Wvmh+y+l Pd.00g666760.m01 149 RWHKTGRTKPMML-DGVQRGCKKIMVLYmsMVRGGKPKKTNWVMHQYHL 196 6********.99********6645777888*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MAGPSWLVDK NRIATKIKSA SGTCDPERIK WQSNPTRACP NCQYTIDNSD VAQEWPGLPK 60 GVKFDPTDQE IIWHLIAKSG AEDLKPHPFI DEFIITVDDD EGICCSHPHK LPSVKQDGSA 120 SHFFHRAIKA YNTGTRKRRK IHDGDGDVRW HKTGRTKPMM LDGVQRGCKK IMVLYMSMVR 180 GGKPKKTNWV MHQYHLGTEE DEKDGEYVIS KIYYQQQQVK QADKTDQDLP ENFDLVITKV 240 DPVTPKSVTP EPPRTERKLA DFDLGQDTRA TSRDPFPQHP EMDQAEDEVH PEMDHAEDEV 300 HPEFEKPDHY DQHNVENEAD EVINNTENNA QEDPKWWDSE SQNLLDSQQL VEGLSLCDDL 360 LQSQSPIRAG HENGEPAQVK PRLADYAKLG PENLKKDLEE CQNIVLDPAN IMLEDTPPDF 420 RLSQLEFGSQ ESFLSWGVKL AD

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MAGPSWLVDK NRIATKIKSA SGTCDPERIK WQSNPTRACP NCQYTIDNSD VAQEWPGLPK  60
GVKFDPTDQE IIWHLIAKSG AEDLKPHPFI DEFIITVDDD EGICCSHPHK LPSVKQDGSA  120
SHFFHRAIKA YNTGTRKRRK IHDGDGDVRW HKTGRTKPMM LDGVQRGCKK IMVLYMSMVR  180
GGKPKKTNWV MHQYHLGTEE DEKDGEYVIS KIYYQQQQVK QADKTDQDLP ENFDLVITKV  240
DPVTPKSVTP EPPRTERKLA DFDLGQDTRA TSRDPFPQHP EMDQAEDEVH PEMDHAEDEV  300
HPEFEKPDHY DQHNVENEAD EVINNTENNA QEDPKWWDSE SQNLLDSQQL VEGLSLCDDL  360
LQSQSPIRAG HENGEPAQVK PRLADYAKLG PENLKKDLEE CQNIVLDPAN IMLEDTPPDF  420
RLSQLEFGSQ ESFLSWGVKL AD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-171	NAC family protein