PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g605460.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LFY
Protein Properties Length: 386aa    MW: 43150.2 Da    PI: 8.5443
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g605460.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY5874.4e-17913681386
           FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklr...eleelfkayGvryltvakiaelGftvstLvdmkdeelddlm 90 
                       mdp+afsaslfkwd r ++++p++  le a++++a+++aaa aa r+ r   +le+lf+ayGvry+t+akiaelGftv+tL+dm+d eldd+m
  Pd.00g605460.m01   1 MDPDAFSASLFKWDLRGMVVPPSRAQLEAAVTPQAAAAAAAYAAVRSPRelgGLEDLFQAYGVRYYTAAKIAELGFTVNTLLDMRDGELDDMM 93 
                       9**************99887766544444444444433333333333334559**************************************** PP

           FLO_LFY  91 kslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet..aldalsqeglseepvqeekeaagsggeglgeaelvaaeekks 181
                       +sls+ifr+dllvGeryGikaavraerrrl++e+  ++rr+++s d++t  aldalsqeg ++++++++       +++  + + ++   +++
  Pd.00g605460.m01  94 SSLSQIFRWDLLVGERYGIKAAVRAERRRLDDED--SRRRHTVSGDTTTtnALDALSQEGEKRKKQRRT------RKGQYRNFNGIGGG-HNN 177
                       ********************************88..8888899888766569********655544332......22222233333333.111 PP

           FLO_LFY 182 eeekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerG 274
                       +++ +              + +e+d+d ++ + + +  +g   +er+rehPfivtepgevargkknGLDYLf+LyeqCr+fL+qvq+iakerG
  Pd.00g605460.m01 178 DHN-E-------------GVDNEDDNDIDDMNRHGNGAGGGLQTERRREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKERG 256
                       111.1.............11122455555566666666666678************************************************* PP

           FLO_LFY 275 ekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsi 367
                       ekcPtkvtnqvfr+akkagasyinkPkmrhYvhCYalhcLdeeasnalrr fkergenvGawr+acykplvaiaa qgw+ida+fn+hprLsi
  Pd.00g605460.m01 257 EKCPTKVTNQVFRFAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRVFKERGENVGAWREACYKPLVAIAAGQGWEIDAIFNSHPRLSI 349
                       ********************************************************************************************* PP

           FLO_LFY 368 WYvPtkLrqLChlerskas 386
                       WYvPtkLr+LCh+er++a+
  Pd.00g605460.m01 350 WYVPTKLRRLCHTERNNAT 368
                       ****************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MDPDAFSASL FKWDLRGMVV PPSRAQLEAA VTPQAAAAAA AYAAVRSPRE LGGLEDLFQA  60
YGVRYYTAAK IAELGFTVNT LLDMRDGELD DMMSSLSQIF RWDLLVGERY GIKAAVRAER  120
RRLDDEDSRR RHTVSGDTTT TNALDALSQE GEKRKKQRRT RKGQYRNFNG IGGGHNNDHN  180
EGVDNEDDND IDDMNRHGNG AGGGLQTERR REHPFIVTEP GEVARGKKNG LDYLFHLYEQ  240
CRDFLIQVQN IAKERGEKCP TKVTNQVFRF AKKAGASYIN KPKMRHYVHC YALHCLDEEA  300
SNALRRVFKE RGENVGAWRE ACYKPLVAIA AGQGWEIDAI FNSHPRLSIW YVPTKLRRLC  360
HTERNNATAS SSASGGGGGG GDHLPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-108LFY family protein