PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g551210.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 355aa MW: 40273.6 Da PI: 6.1968

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g551210.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49	1.5e-15	51	110	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n+ k+ ++++lg ++++e Aa ++ a++k++g Pd.00g551210.m02 51 SIYRGVTRHRWTGRFEAHLWDkSSWNNiqnKKgRQVYLGAYDSEEAAAHTYDLAALKYWG 110 57*****************777799977447***********************98 PP
2	AP2	53	8.4e-17	153	205	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a+++a+ +++g+ Pd.00g551210.m02 153 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYNTQEEAAAAYDRAAIEYRGA 205 89**99******99966...3.6***********************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MVLLPWPETP HLNQAENQKP KAKRIRKNQN NPTEKCQNGT NPNTGGGRRS SIYRGVTRHR 60 WTGRFEAHLW DKSSWNNIQN KKGRQVYLGA YDSEEAAAHT YDLAALKYWG PGTTLNFPIE 120 TYTKELEEMQ KASREEYLAS LRRRSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL 180 YLGTYNTQEE AAAAYDRAAI EYRGANAVTN FDINNYIDKF KKESEETPPK CFDAGLPEDE 240 KYPHLLHCIE SNTMDQVMDA ADEHKFTWNF LDTGLMAQLP VPDIPLDNKP LELPDFFEDL 300 RFEENFDLIF GAAGDADLGG LMESAGCGVE EGVPRNLEDN RSSSSPSSTT TSVSF

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MVLLPWPETP HLNQAENQKP KAKRIRKNQN NPTEKCQNGT NPNTGGGRRS SIYRGVTRHR  60
WTGRFEAHLW DKSSWNNIQN KKGRQVYLGA YDSEEAAAHT YDLAALKYWG PGTTLNFPIE  120
TYTKELEEMQ KASREEYLAS LRRRSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL  180
YLGTYNTQEE AAAAYDRAAI EYRGANAVTN FDINNYIDKF KKESEETPPK CFDAGLPEDE  240
KYPHLLHCIE SNTMDQVMDA ADEHKFTWNF LDTGLMAQLP VPDIPLDNKP LELPDFFEDL  300
RFEENFDLIF GAAGDADLGG LMESAGCGVE EGVPRNLEDN RSSSSPSSTT TSVSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	1e-93	AP2 family protein