PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g467410.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 633aa MW: 70137 Da PI: 6.7705

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g467410.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	51	3.6e-16	301	360	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g Pd.00g467410.m01 301 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 360 78*****************988886678446***********************98 PP
2	AP2	46	1.3e-14	405	454	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Pd.00g467410.m01 405 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 454 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 633 aa Download sequence
MIELPCHKRN LPTISDQNRE EEEKSSNLEK SSSSSVAAIA SSVPTSFFHS PPHFNYGIYY 60 GVEGDTSAGL YSPLSMMPLK SDGSLCIMEA LNRSQQPQGI VTTTTTSTPK LEDFFGGATM 120 GTHYENNDRE AMALSLDSMH QEQSVHQVQV QAQQQQYSYY SGLRGHEMML EEGHKETHLA 180 ADNYNLQQPR MGPDQSISEM KCWISRNYAA NHAMEHNMIG CMGDNGAESG SIGAMPYGDL 240 QSLSLSMSPG SQSSCVTGSQ QISPTLADSV TMDTKKRGPE KVDQKQIVHR KSLDTFGQRT 300 SQYRGVTRHR WTGRYEAHLW DNSCKKEGQS RKGRQVYLGG YDMEEKAARA YDLAALKYWG 360 PSTHINFPLE NYQKELEDMK NMTRQEYVAH LRRKSSGFSR GASMYRGVTR HHQHGRWQAR 420 IGRVAGNKDL YLGTFSTQEE AAEAYDIAAI KFRGLNAVTN FDITRYDVDR IMASNTLLAG 480 ELAKRNKETA PVNEAATNQN HVAQTSNGEA IVSLKNINEG EDWKMALYQS SQQLDQKQPS 540 TEPHNAIQAE AEDSGKMGAA HVSNASSLVT SLSSSREGSP DKSCLPSFFG MPPAASKFFT 600 SSSDTVSSWI PTVQSRPGLT MPHMPIFAAW TDA

Sequence ? help Back to Top

Protein Sequence Length: 633 aa Download sequence

MIELPCHKRN LPTISDQNRE EEEKSSNLEK SSSSSVAAIA SSVPTSFFHS PPHFNYGIYY  60
GVEGDTSAGL YSPLSMMPLK SDGSLCIMEA LNRSQQPQGI VTTTTTSTPK LEDFFGGATM  120
GTHYENNDRE AMALSLDSMH QEQSVHQVQV QAQQQQYSYY SGLRGHEMML EEGHKETHLA  180
ADNYNLQQPR MGPDQSISEM KCWISRNYAA NHAMEHNMIG CMGDNGAESG SIGAMPYGDL  240
QSLSLSMSPG SQSSCVTGSQ QISPTLADSV TMDTKKRGPE KVDQKQIVHR KSLDTFGQRT  300
SQYRGVTRHR WTGRYEAHLW DNSCKKEGQS RKGRQVYLGG YDMEEKAARA YDLAALKYWG  360
PSTHINFPLE NYQKELEDMK NMTRQEYVAH LRRKSSGFSR GASMYRGVTR HHQHGRWQAR  420
IGRVAGNKDL YLGTFSTQEE AAEAYDIAAI KFRGLNAVTN FDITRYDVDR IMASNTLLAG  480
ELAKRNKETA PVNEAATNQN HVAQTSNGEA IVSLKNINEG EDWKMALYQS SQQLDQKQPS  540
TEPHNAIQAE AEDSGKMGAA HVSNASSLVT SLSSSREGSP DKSCLPSFFG MPPAASKFFT  600
SSSDTVSSWI PTVQSRPGLT MPHMPIFAAW TDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-154	AP2 family protein