PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g427000.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | AP2 | ||||||||
Protein Properties | Length: 186aa MW: 21962.2 Da PI: 10.7443 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 27.4 | 8.7e-09 | 72 | 114 | 1 | 38 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgt 38 s+y GV++++++gr++A+++d ++ g ++ ++++lg++ Pd.00g427000.m01 72 SQYIGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGSYED 114 789******************988886678446*******975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MDLPRLSMMV KLSSNRLSWR TLWRMLEDHV ENVGVKLVRQ AGAKTKKRGG GKLSQKQPVH 60 RKSIDTFGQR TSQYIGVTRH RWTGRYEAHL WDNSCKKEGQ TRKGRQVYLG SYEDDKCEQD 120 DLRWLQKIWK AAGMNLDNGK VEFVWSSKEI NARSHEYWPR VMDIARKYTV NRITRCGQIM 180 GRYEAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 5e-31 | AP2 family protein |