PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g411410.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 296aa    MW: 33224.5 Da    PI: 10.2094
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g411410.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B364.81.3e-20221041099
                       HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        + s+rl++p kf+++++   + + +  l  +sg +W+v+l  + + ++ ++++GW++Fvk+++L++gD +vFk+dg+s+f  +v+++++
  Pd.00g411410.m01  22 DF-SQRLRIPPKFVKNFNVR-PLH-KCALSGPSGIRWTVEL--EERENGLFFQDGWQGFVKDHHLEDGDCLVFKYDGESKF--KVTIYDR 104
                       44.457********666544.454.899*************..**********************************9999..8988886 PP
2B336.96.4e-122012811698
                       EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       + +pk+ a + g+ +  +k ++++d++grsW vkl++  + +s+r+ +++G  + ++an++  gD+ +F++++ s +   v++fr
  Pd.00g411410.m01 201 VLIPKEVAVTEGLLS--KKSMMIQDPTGRSWPVKLRVrgKLSSCRVNMSTGLLDCCNANQIIPGDTAIFEFVKPSLA--QVHIFR 281
                       789999999998874..4569**************996666777799***********************9885555..888887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MARKLVKPSL NKQSFFKILL GDFSQRLRIP PKFVKNFNVR PLHKCALSGP SGIRWTVELE  60
ERENGLFFQD GWQGFVKDHH LEDGDCLVFK YDGESKFKVT IYDRTACEKN VKVAERSGCP  120
VSLANKGKAQ VKEEIVDRET RNYNKNCQNK AIVSGRSGNY VIPGRRPAND HVGATSTEPV  180
LFKPKYSCFI ITFTRKLRYG VLIPKEVAVT EGLLSKKSMM IQDPTGRSWP VKLRVRGKLS  240
SCRVNMSTGL LDCCNANQII PGDTAIFEFV KPSLAQVHIF RVGGNSVVLA TPDVKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.15e-22B3 family protein