PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g382220.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 387aa MW: 43867.8 Da PI: 6.3433

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g382220.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	6.9e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++++G+g +W + ++++g++R++k+c++rw++yl Pd.00g382220.m01 14 KGPWSPEEDARLKAYIEEHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.3	6.2e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ Pd.00g382220.m01 69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDARLKAYIE EHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGR 120 RKQPNMNRSP SGQSEDHLKD AEDAHALSSS ALERLQLHMQ LQSLQNPFSF YNTPALWPKL 180 HPLQEKMIQT LRSMNDQNCN NPLMHHHALS SPHQTVEGHK SNSDVYEQLQ PISASIRIQE 240 EYAKLCNPKN MDELENALNG MSSSDAAYHA YISTSNQVDS TIVVTKAADG MEHSNDAGTH 300 DHQQVNSSFQ TEFGDILSNK SVAYTPQQED DQITEYDCFT EMNGSKDSLV WWANEFDAKS 360 ASLNSWDSTS VLQSQGMFQE YELRYNL

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDARLKAYIE EHGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGR  120
RKQPNMNRSP SGQSEDHLKD AEDAHALSSS ALERLQLHMQ LQSLQNPFSF YNTPALWPKL  180
HPLQEKMIQT LRSMNDQNCN NPLMHHHALS SPHQTVEGHK SNSDVYEQLQ PISASIRIQE  240
EYAKLCNPKN MDELENALNG MSSSDAAYHA YISTSNQVDS TIVVTKAADG MEHSNDAGTH  300
DHQQVNSSFQ TEFGDILSNK SVAYTPQQED DQITEYDCFT EMNGSKDSLV WWANEFDAKS  360
ASLNSWDSTS VLQSQGMFQE YELRYNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	6e-97	MYB family protein