PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g352970.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 289aa    MW: 33082.1 Da    PI: 9.7177
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g352970.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.12.8e-1716101296
                       EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                       fkvl       s+rl++p  f+++ +g    + + tl+d+sg  W+v l  + +++r+++ +GW+ Fvk++ L+   ++vF +dg+s+f   v
  Pd.00g352970.m01  16 FKVL--VG-DFSQRLSIPPAFMDHVNGR--LPPKCTLRDPSGDCWTVGL--EVRGDRFFFHEGWQPFVKDHSLEIANVLVFDYDGKSKF--DV 99 
                       5555..33.34568********777555..55679**************..*********************************99988..55 PP

                       EE CS
                B3  95 kv 96 
                       ++
  Pd.00g352970.m01 100 TL 101
                       55 PP
2B358.89.6e-19182276699
                       ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                       ++++  ++ r+ +pk+ a + g++   +k +++ed++g sW+vkl+    + ++gr ++tkGW+e ++an++  gD++vF+l++ +++ ++++
  Pd.00g352970.m01 182 IRAMRKNRYRMNFPKELAVAKGLIR--KKSVRVEDPNGISWDVKLRLdekEHNGGRLLMTKGWSECCQANNISLGDTMVFELVNAMRGGMKMH 272
                       5566778899************995..557***************99877777778***************************999999**** PP

                       EE-S CS
                B3  96 vfrk 99 
                       +fr 
  Pd.00g352970.m01 273 IFRG 276
                       *996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MGRKPTKPSP KIPSFFKVLV GDFSQRLSIP PAFMDHVNGR LPPKCTLRDP SGDCWTVGLE  60
VRGDRFFFHE GWQPFVKDHS LEIANVLVFD YDGKSKFDVT LYDPIGSEME LEPAKNRRGN  120
RARVEEEIIE LDTEEDSEED ARMSNIRKRK SFKSGKRIAR TDSGKETSNA PIVFISKHLC  180
FIRAMRKNRY RMNFPKELAV AKGLIRKKSV RVEDPNGISW DVKLRLDEKE HNGGRLLMTK  240
GWSECCQANN ISLGDTMVFE LVNAMRGGMK MHIFRGNTYV VLDASCVKY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.14e-18B3 family protein