PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g294520.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HB-other

Protein Properties

Length: 558aa MW: 61726.3 Da PI: 6.2954

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g294520.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.8	9.2e-19	21	79	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 k ++t+eq+e+Le+++ ++++ps +r++L +++ +++ +q+kvWFqNrR +ek+ Pd.00g294520.m01 21 KYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 79 6789*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MALVMNRDSP GSSSKQMDSS KYVRYTPEQV EALERVYSEC PKPSSLRRQQ LIRECPILSN 60 IEPKQIKVWF QNRRCREKQR KESSRLQTVN RKLTAMNKLL MEENDRLQKQ ASGTTTDNSC 120 ESVVMSGQHQ QQQNPTPQHP QRDANNPAGL LAIAEETLAE FLSKATGTAV DWVQMIGMKS 180 VPPALLVRFL REHRSEWADY GVDAYSAACL KASPYAVPCA RPGGFPSSQV ILPLAQTVEN 240 EEFLEVVRLE GHAFSPEDVA LARDMYLLQL CSGVDENAVG SCAQLVFAPI DESFADDAPL 300 LPSGFHVIPL DPKTDGPTAN RTLDLASTLE VGPSGSRPVN EADGNSYNLR SVLTIAFQFT 360 FENHLRDNVA AMARQYVRSV VSSVQRVAMA IAPSRLSSQM VPKPLPGSPE AHTLARWICR 420 SYRIHTGADL FRVDSPSGDA VLKQLWHHSD AIMCCSVKTN ASPVFTFANQ AGLDMLETTL 480 VALQDIMLDK ILDEAGRKIL CSEFSKIMQQ GFAYLPAGLC ASSMGRPVSY DQAVAWKVVN 540 DDDSNHCLAF MFMSWSFV

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MALVMNRDSP GSSSKQMDSS KYVRYTPEQV EALERVYSEC PKPSSLRRQQ LIRECPILSN  60
IEPKQIKVWF QNRRCREKQR KESSRLQTVN RKLTAMNKLL MEENDRLQKQ ASGTTTDNSC  120
ESVVMSGQHQ QQQNPTPQHP QRDANNPAGL LAIAEETLAE FLSKATGTAV DWVQMIGMKS  180
VPPALLVRFL REHRSEWADY GVDAYSAACL KASPYAVPCA RPGGFPSSQV ILPLAQTVEN  240
EEFLEVVRLE GHAFSPEDVA LARDMYLLQL CSGVDENAVG SCAQLVFAPI DESFADDAPL  300
LPSGFHVIPL DPKTDGPTAN RTLDLASTLE VGPSGSRPVN EADGNSYNLR SVLTIAFQFT  360
FENHLRDNVA AMARQYVRSV VSSVQRVAMA IAPSRLSSQM VPKPLPGSPE AHTLARWICR  420
SYRIHTGADL FRVDSPSGDA VLKQLWHHSD AIMCCSVKTN ASPVFTFANQ AGLDMLETTL  480
VALQDIMLDK ILDEAGRKIL CSEFSKIMQQ GFAYLPAGLC ASSMGRPVSY DQAVAWKVVN  540
DDDSNHCLAF MFMSWSFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34710.1	0.0	HD-ZIP family protein