PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g279630.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 503aa MW: 55587.3 Da PI: 5.3827

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g279630.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.1	2e-33	278	332	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv++Lt++hvkSHLQkYR+ Pd.00g279630.m01 278 KARMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVESLTIYHVKSHLQKYRT 332 68****************************************************8 PP
2	Myb_DNA-binding	54.3	3.1e-17	280	331	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k + + m + +t +++ks++qky+ Pd.00g279630.m01 280 RMRWTPELHEAFVEAVNQLGGSeraTPKGVLKLMKvESLTIYHVKSHLQKYR 331 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MEARPALSIQ RSAAKQFTHL GVSAAMSSSL PVLRNPMEET YPKLPDSQQV SMERELMTRP 60 VVHAGHLTSN SGVVGHIFSS SSGFSTDLHY SAPSPHEKQP KNNPFISQSS SSVSLQLPHS 120 SHSGFLQSTS SCPYSKENSG SWCTDSLPGF LDFPVNNHIE NSQVESSSCS GIMPAEEFVK 180 RSDWQEWADQ LITDDDALTS NWNELLVDNN VTDLEPKIKY QVPKPSSNFS AQQPQVHQQQ 240 PAPSGEIIPA PSRELIPAPS REIISVTAPS SANSAPAKAR MRWTPELHEA FVEAVNQLGG 300 SERATPKGVL KLMKVESLTI YHVKSHLQKY RTARYRPESS EGSSEKKLTP IEEMTSLDLK 360 TGIEITEALR LQMEVQKRLH EQLEIQRNLQ LRIEEQGKYL QMMFEKQCKT GIDTLKASSL 420 NLDDPADPLD AMQACPDKSE LEPSKVDLGK TETDPVKANT KSEEGSLELS GKQKVPETEA 480 PEDPELDVSV SSSQPPKRPK IKE

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MEARPALSIQ RSAAKQFTHL GVSAAMSSSL PVLRNPMEET YPKLPDSQQV SMERELMTRP  60
VVHAGHLTSN SGVVGHIFSS SSGFSTDLHY SAPSPHEKQP KNNPFISQSS SSVSLQLPHS  120
SHSGFLQSTS SCPYSKENSG SWCTDSLPGF LDFPVNNHIE NSQVESSSCS GIMPAEEFVK  180
RSDWQEWADQ LITDDDALTS NWNELLVDNN VTDLEPKIKY QVPKPSSNFS AQQPQVHQQQ  240
PAPSGEIIPA PSRELIPAPS REIISVTAPS SANSAPAKAR MRWTPELHEA FVEAVNQLGG  300
SERATPKGVL KLMKVESLTI YHVKSHLQKY RTARYRPESS EGSSEKKLTP IEEMTSLDLK  360
TGIEITEALR LQMEVQKRLH EQLEIQRNLQ LRIEEQGKYL QMMFEKQCKT GIDTLKASSL  420
NLDDPADPLD AMQACPDKSE LEPSKVDLGK TETDPVKANT KSEEGSLELS GKQKVPETEA  480
PEDPELDVSV SSSQPPKRPK IKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-110	G2-like family protein