PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g248610.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 511aa MW: 56272.5 Da PI: 6.6829

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g248610.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.7	2.1e-11	128	184	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g Pd.00g248610.m01 128 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARAYDLAALKYWG 184 57*****************5444.2455536655.779999************98 PP
2	AP2	47.2	5.4e-15	229	278	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g Pd.00g248610.m01 229 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 278 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MDNPFQNQEW NFINTQGSNE VPKVADFLGV SKSENHSDLV AFNDIQANDS VSDYLFPNNS 60 IVPVQDTVVA NSSSYDFQEK SNSLQSLTLS MGSGKGSSAC ETSTDNTSIA TVEAPPRRTL 120 DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS CRREGQSRKG RQGGYDKEEK AARAYDLAAL 180 KYWGTSTTTN FPISNYEKEV EEMKNMTRQE FVAAIRRKSS GFSRGASMYR GVTRHHQHGR 240 WQARIGRVAG NKDLYLGTFS TEEEAAEAYD IAAIKFRGLN AVTNFDMSRY DVKSILESNT 300 LPIGGGAAKR LKEAQALESS RKREEMIALG STFQYAAAGA TSSSTSAGRN LQAYSLMQQQ 360 STFDQGVQQP SQPLLSLQNH DISQYSHHHD PSSYQNYIQT QLQLHQAQQQ YQPTQNPHHQ 420 FYNSYGLQST HPALLQGLMD MGSASGVMDH NNGSSSGSYS AGGYLGNNGI GLASNSSASN 480 AVGSAEELAL VKVDYDMPNG GGGYGYFYNV E

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MDNPFQNQEW NFINTQGSNE VPKVADFLGV SKSENHSDLV AFNDIQANDS VSDYLFPNNS  60
IVPVQDTVVA NSSSYDFQEK SNSLQSLTLS MGSGKGSSAC ETSTDNTSIA TVEAPPRRTL  120
DTFGQRTSIY RGVTRHRWTG RYEAHLWDNS CRREGQSRKG RQGGYDKEEK AARAYDLAAL  180
KYWGTSTTTN FPISNYEKEV EEMKNMTRQE FVAAIRRKSS GFSRGASMYR GVTRHHQHGR  240
WQARIGRVAG NKDLYLGTFS TEEEAAEAYD IAAIKFRGLN AVTNFDMSRY DVKSILESNT  300
LPIGGGAAKR LKEAQALESS RKREEMIALG STFQYAAAGA TSSSTSAGRN LQAYSLMQQQ  360
STFDQGVQQP SQPLLSLQNH DISQYSHHHD PSSYQNYIQT QLQLHQAQQQ YQPTQNPHHQ  420
FYNSYGLQST HPALLQGLMD MGSASGVMDH NNGSSSGSYS AGGYLGNNGI GLASNSSASN  480
AVGSAEELAL VKVDYDMPNG GGGYGYFYNV E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	0.0	AP2 family protein