PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g225150.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 600aa MW: 66461 Da PI: 4.6414

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g225150.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	22.7	2.5e-07	100	147	5	55
AP2 5 GVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55 GV+++ gr++A ++d +e + +k g f t+eeAa+a++ a++kl+g Pd.00g225150.m01 100 GVSRYT-GGRYEAFLWDNTEpR--SKGKT-GGFETEEEAARAHDLAALKLWG 147 99999.8******65543..56655.77***************987 PP
2	AP2	45.7	1.6e-14	190	241	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ ++W A++ +g k ++lg+f t+eeAa+a++ a+ +++g Pd.00g225150.m01 190 STYRGVSRNSYHKKWQARLGK---GG-GlKGVYLGTFATEEEAARAYDVAAIRMKG 241 56**************444...33.46**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 600 aa Download sequence
MQQNSPWILE SSPVEAPHCN TFPSANYPFS SSMHVESDQD FIGEKNINDN GINIFGDPFM 60 SYDCINEEDN GRSGEKLTKR KRHCKNSKKK IVQTGSAFYG VSRYTGGRYE AFLWDNTEPR 120 SKGKTGGFET EEEAARAHDL AALKLWGDFA TLNFTLNEYK KELEEMQGMS KQDYFLHIRR 180 TSATFAKGLS TYRGVSRNSY HKKWQARLGK GGGLKGVYLG TFATEEEAAR AYDVAAIRMK 240 GTKAVTNFDL SQYDLNSIFN SAKLPIGKGA SKKLRWSSVD DVLENRRSSG ANQKIPILQL 300 DEDYSTGISR LSSTTQPSSS FEPTIHQILP TPNNSNLNQY VSPFSYHALQ NTDIQYNQLP 360 QDFNVNPSSQ VQDVPGCENL NFQRSPSLNQ WVGSYGGGDN SEGSGFSVGG SQIYGSLDGD 420 PTMRQFVDGN SSGFSFGRDV ENHEFDQLHQ YNSDSYSQYL NQNPSFSSLL QDSMQVPNNP 480 QTFYPTFLPG LTNLDPGPGY VGESSLSVSQ VPEVSLEAML EENNQSCGNG IINEVFSLNH 540 EVPVNIMEGN STVQPGYAEN GNFVEDFGVG KSAGLDLDDD FPASWVEMFL MTLEGSDCHV

Sequence ? help Back to Top

Protein Sequence Length: 600 aa Download sequence

MQQNSPWILE SSPVEAPHCN TFPSANYPFS SSMHVESDQD FIGEKNINDN GINIFGDPFM  60
SYDCINEEDN GRSGEKLTKR KRHCKNSKKK IVQTGSAFYG VSRYTGGRYE AFLWDNTEPR  120
SKGKTGGFET EEEAARAHDL AALKLWGDFA TLNFTLNEYK KELEEMQGMS KQDYFLHIRR  180
TSATFAKGLS TYRGVSRNSY HKKWQARLGK GGGLKGVYLG TFATEEEAAR AYDVAAIRMK  240
GTKAVTNFDL SQYDLNSIFN SAKLPIGKGA SKKLRWSSVD DVLENRRSSG ANQKIPILQL  300
DEDYSTGISR LSSTTQPSSS FEPTIHQILP TPNNSNLNQY VSPFSYHALQ NTDIQYNQLP  360
QDFNVNPSSQ VQDVPGCENL NFQRSPSLNQ WVGSYGGGDN SEGSGFSVGG SQIYGSLDGD  420
PTMRQFVDGN SSGFSFGRDV ENHEFDQLHQ YNSDSYSQYL NQNPSFSSLL QDSMQVPNNP  480
QTFYPTFLPG LTNLDPGPGY VGESSLSVSQ VPEVSLEAML EENNQSCGNG IINEVFSLNH  540
EVPVNIMEGN STVQPGYAEN GNFVEDFGVG KSAGLDLDDD FPASWVEMFL MTLEGSDCHV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	8e-51	AP2 family protein