PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g185090.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 424aa MW: 46346 Da PI: 8.031 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.2 | 1.7e-17 | 55 | 104 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +gr++AeIrdp + r +lg+f+taeeAa a++ a+++++g Pd.00g185090.m01 55 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 104 59*******.**********93....35999**********************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 424 aa Download sequence |
MEEAFRRLNG FTRSTEPDPI SDPPRKSTTA TPTNKRMLRD TTTAAGTGTG AGAMRYRGVR 60 RRPWGRYAAE IRDPQSKERR WLGTFDTAEE AACAYDCAAR AMRGLKARTN FVYPPSPPHA 120 AVNDHLLPPF SFHKQSQPSV KSRNGYGAGH SSSWPSVTPF TQYPTTNNND AAASPLNMLF 180 FRNFINSSPN PSPVYNQFPY NISGSSSSSS SAALVNTASC GQPHETNMSA STNFSSTGTG 240 SSSSMTVATS VPLMDITTSS TKPTTHDDHS DFFAVEPSDS GLLEEVIHRF FPKPSSKKSM 300 DPPKSADYGR HNMNNIPSSY SQASFVSANQ APPFDGPTKN HPHQHGGVCY NFEELLPQPQ 360 QLGNSFSVGM DYQPQVSQTT QAVPFYNDHV PINVQLGGQD YSMVDNNMFQ YPEFMGGFAG 420 RVQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G24590.1 | 5e-14 | ERF family protein |