PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g134420.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ARR-B
Protein Properties Length: 718aa    MW: 77883.1 Da    PI: 6.4189
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g134420.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.33e-27232285155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kpr++W+ eLH++Fv+av+qL G +kA+Pk+ilelm+v+gL++e+v+SHLQk+Rl
  Pd.00g134420.m01 232 KPRVVWSVELHQQFVSAVNQL-GLDKAVPKRILELMNVPGLSRENVASHLQKFRL 285
                       79*******************.********************************8 PP
2Myb_DNA-binding391.9e-12234284148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W+ e+++++v av+qlG +   +k+I + m+  g++++++ s++qk++
  Pd.00g134420.m01 234 RVVWSVELHQQFVSAVNQLGLDkaVPKRILELMNvPGLSRENVASHLQKFR 284
                       678**********************************************97 PP
3Response_reg74.83.2e-25481561109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl+vdD+ + +++l+++l +  y +v+++++++ al+ll+e++  +D++l D+ mp+mdG++ll++   e  +lp+i+++a g  + + + ++
  Pd.00g134420.m01  48 VLVVDDDTTCLRILEVLLGRCAY-QVTACSQATVALNLLRERKgcFDVVLSDVHMPDMDGFKLLEHVGLEM-DLPVIMMSADGRTSAVMQGIR 138
                       89*********************.*******************************************6644.8******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp++++el +
  Pd.00g134420.m01 139 HGACDYLIKPIHEAELKN 156
                       ***************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 718 aa     Download sequence    
MAALQRVAQS SVSTTASSYG SCKGGAASSF SAANEMAVSD RFPAGLRVLV VDDDTTCLRI  60
LEVLLGRCAY QVTACSQATV ALNLLRERKG CFDVVLSDVH MPDMDGFKLL EHVGLEMDLP  120
VIMMSADGRT SAVMQGIRHG ACDYLIKPIH EAELKNIWQH VVRKKWNGNK ELDHSGSLED  180
NDRNKRGNSD VEYTSSVNEG TEVILKGTKK RSSAKEDDDV DMENDDPSTS KKPRVVWSVE  240
LHQQFVSAVN QLGLDKAVPK RILELMNVPG LSRENVASHL QKFRLYLKRL AQQQSGISNG  300
FCGPVESNGK LGSLSRFDIQ ALAASGQIPP QTLAVLQAEL LGQPAGNLVT AMDQPAILHA  360
PLQGPKHAPV EHGVPFVQPL IKCQSNISKH FPQSIIPAED VSSGFGSWRS NSLSTVAPSN  420
NLGGLATHNS SMLMDIMQQE QRQHKKTQQQ SVLTESSRLI NVQPSCLVVP SQSSTSFQAG  480
NSPASVNQNC SFNRSTVIDY SILSAQSNNS SLNIGHIPTG NLKTPSILDG YSAPGSVPST  540
SCSVNAGNNT SHQNSAVPFC DSRQLPVVLH DMSNIQGLYV DKSGEMLDQG PLRNLGFVGK  600
ETGIPSQFAV DDFESQASNL NHGKIYVENN GNPVKEEPMC SLNRLLLCDL ISVPAPELGV  660
ERPSVPETQK LRTNLICGGW RFTFMKRVRD LPKEEEQVVA ESLDIVDLIL KGRSDLAE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-115ARR-B family protein