PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1283370.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WOX

Protein Properties

Length: 356aa MW: 40486.1 Da PI: 8.3552

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1283370.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.5	4e-22	91	150	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psae++++++++l +++ ++V++WFqN++a+e++ Pd.00g1283370.m01 91 SRWNPTPEQLRALEELYRRgTRTPSAEQIQHITAQLrkygKIEGKNVFYWFQNHKARERQ 150 7***************99************************************97 PP
2	Wus_type_Homeobox	115.7	2.2e-37	90	152	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L++yGkie+kNVfyWFQN+kaRerqk+ Pd.00g1283370.m01 90 SSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRKYGKIEGKNVFYWFQNHKARERQKR 152 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MWMMGYNESG HADFNMPDSF NGRKLRPLIP RPLVPSANNA TSSVTAATPP CLNRIHGISH 60 DFFTQYHHLA AMAEQNKRSE FINTPQVVVS SRWNPTPEQL RALEELYRRG TRTPSAEQIQ 120 HITAQLRKYG KIEGKNVFYW FQNHKARERQ KRRRQMESSV PSVQPDHEIS LSSTDHQKKE 180 SLGASRTVFE VEQTKNWAPS TNCSTTLAEE SVSIQRAAKA AVAATECRTD GWIQFDEEEL 240 QQRRNFAERN ATTASRAATV RPVDQRLIKG HDLSILLTPY SSISEEFGFI NFNHPNHNTN 300 VEQDHGCGES QTLQLFPLRS GHANANANLE KDHAELSANF SRAQPYPFFE FLPLKN

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MWMMGYNESG HADFNMPDSF NGRKLRPLIP RPLVPSANNA TSSVTAATPP CLNRIHGISH  60
DFFTQYHHLA AMAEQNKRSE FINTPQVVVS SRWNPTPEQL RALEELYRRG TRTPSAEQIQ  120
HITAQLRKYG KIEGKNVFYW FQNHKARERQ KRRRQMESSV PSVQPDHEIS LSSTDHQKKE  180
SLGASRTVFE VEQTKNWAPS TNCSTTLAEE SVSIQRAAKA AVAATECRTD GWIQFDEEEL  240
QQRRNFAERN ATTASRAATV RPVDQRLIKG HDLSILLTPY SSISEEFGFI NFNHPNHNTN  300
VEQDHGCGES QTLQLFPLRS GHANANANLE KDHAELSANF SRAQPYPFFE FLPLKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	5e-59	WOX family protein