PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1274590.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 540aa MW: 59336.6 Da PI: 5.7589

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1274590.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	105.9	2.2e-33	315	369	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv++Lt++hvkSHLQkYR+ Pd.00g1274590.m01 315 KARMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVESLTIYHVKSHLQKYRT 369 68****************************************************8 PP
2	Myb_DNA-binding	54.2	3.4e-17	317	368	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k + + m + +t +++ks++qky+ Pd.00g1274590.m01 317 RMRWTPELHEAFVEAVNQLGGSeraTPKGVLKLMKvESLTIYHVKSHLQKYR 368 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 540 aa Download sequence
MKATSSGASL EINGAALRAF QLPKGHSNYP IPSKGLLMEA RPALSIQRSA AKQFTHLGVS 60 AAMSSSLPVL PNPMEETYPK LPDSQQVSME RELMTRPVVH AGHLTSNSGV VGHIFSSSSG 120 FSTDLHYSAP SPHEKQPKNN PFISQSSSSV SLQLPHSSHS GFLQSTSSCP YSKENSGSWC 180 TDSLPGFLDF PVNNHIENSQ VESSSCSGIM PAEEFVKRSD WQEWADQLIT DDDALTSNWN 240 ELLVDNNVTD LEPKIKYQVP KPSSNFSAQQ PQVHQQQPAP SGEIIPAPSR ELIPAPSREI 300 ISVTAPSSAN SAPAKARMRW TPELHEAFVE AVNQLGGSER ATPKGVLKLM KVESLTIYHV 360 KSHLQKYRTA RYRPESSEGS SEKKLTPIEE MTSLDLKTGI EITEALRLQM EVQKRLHEQL 420 EIQRNLQLRI EEQGKYLQMM FEKQCKTGID TLKASSLNLD DPADPLDAMQ ACPDKSELEP 480 SKVDLGKTET DPVKANTKSE EGSLELSGKQ KVPETEAPED PELDVSVSSS QPPKRPKIKE

Sequence ? help Back to Top

Protein Sequence Length: 540 aa Download sequence

MKATSSGASL EINGAALRAF QLPKGHSNYP IPSKGLLMEA RPALSIQRSA AKQFTHLGVS  60
AAMSSSLPVL PNPMEETYPK LPDSQQVSME RELMTRPVVH AGHLTSNSGV VGHIFSSSSG  120
FSTDLHYSAP SPHEKQPKNN PFISQSSSSV SLQLPHSSHS GFLQSTSSCP YSKENSGSWC  180
TDSLPGFLDF PVNNHIENSQ VESSSCSGIM PAEEFVKRSD WQEWADQLIT DDDALTSNWN  240
ELLVDNNVTD LEPKIKYQVP KPSSNFSAQQ PQVHQQQPAP SGEIIPAPSR ELIPAPSREI  300
ISVTAPSSAN SAPAKARMRW TPELHEAFVE AVNQLGGSER ATPKGVLKLM KVESLTIYHV  360
KSHLQKYRTA RYRPESSEGS SEKKLTPIEE MTSLDLKTGI EITEALRLQM EVQKRLHEQL  420
EIQRNLQLRI EEQGKYLQMM FEKQCKTGID TLKASSLNLD DPADPLDAMQ ACPDKSELEP  480
SKVDLGKTET DPVKANTKSE EGSLELSGKQ KVPETEAPED PELDVSVSSS QPPKRPKIKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-111	G2-like family protein