PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g127260.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 301aa    MW: 34094 Da    PI: 9.4039
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g127260.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.26.2e-1815104199
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       ffk+l     ++++ l++p  f+++++g   + ++ +l+ +sg+   v+l  + + ++ +++kGW++Fvk+++L++g f+vF++dg+s+f  +
  Pd.00g127260.m01  15 FFKIL--LGDFSKH-LRIPPAFIKNFNGG--SLRKCSLRGPSGKGRAVEL--EERENGLFFSKGWQGFVKDHHLEVGNFLVFRYDGESKF--K 98 
                       67777..7778888.********888555..45589**************..**********************************9999..8 PP

                       EEEE-S CS
                B3  94 vkvfrk 99 
                       v+++++
  Pd.00g127260.m01  99 VTIYDR 104
                       988887 PP
2B350.15.2e-162012791494
                       T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                        +l++pkk a + g  +++   +tl+d++gr W vkl +  + + +r+ +t+GW e ++an++ +gD++vF+++++s     +
  Pd.00g127260.m01 201 YCLMIPKKLAIAEGFTSAR--NVTLQDPNGRLWLVKLVIrpKTSCKRVEFTTGWGECCQANQISVGDTMVFEFVKQSAI--QL 279
                       349*******888877555..7***************8777777788*************************9876555..44 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MARKLMKRSV KKESFFKILL GDFSKHLRIP PAFIKNFNGG SLRKCSLRGP SGKGRAVELE  60
ERENGLFFSK GWQGFVKDHH LEVGNFLVFR YDGESKFKVT IYDRSACEKD VEVAKRGIGS  120
SDSMESKGNQ VRVKEEIIDL ETENNNEDYE NKTSITNRRN GNAMSGKKPT TEYVEETSSE  180
CISFKSDHRC FMETMKRHYR YCLMIPKKLA IAEGFTSARN VTLQDPNGRL WLVKLVIRPK  240
TSCKRVEFTT GWGECCQANQ ISVGDTMVFE FVKQSAIQLH IFGAVNGKGC PVVLDAPTGE  300
N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.17e-21B3 family protein