PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1272590.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 164aa MW: 18409.1 Da PI: 9.071 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 41.3 | 4.9e-13 | 6 | 85 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgy..Wkatgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 +e+++yfF++ +kk+ +g+r +++ + g W+++ + k+++++ +++++g k+++ + +++++ k +Wvmhe+rl Pd.00g1272590.m01 6 GETSLYFFTELKKKTGKGSRIEKMSSGGCvtWRNQSN-KAIYVNddepNKTVIGYKRMFSYVLKKTSTKAKGEWVMHEFRL 85 46788******************88877556*98876.67777657878888**********99999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MEEAPGETSL YFFTELKKKT GKGSRIEKMS SGGCVTWRNQ SNKAIYVNDD EPNKTVIGYK 60 RMFSYVLKKT STKAKGEWVM HEFRLAGCLV NNNNQSYEAT LTCPLYDYFF LPSSEVSVDI 120 NVSYLNSAYS GEEVEVEAKA LRVGKVVGVA SVELRKKKTC KIIA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 4e-07 | NAC family protein |