PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1186340.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 607aa MW: 69498.9 Da PI: 9.8156 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 60.6 | 2.7e-19 | 64 | 145 | 11 | 99 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + s+rl++p kf+e+++g+ + ++ l+ +s + W+vkl + + ++ ++++GW++Fvk++ L++gD +vF+++g+s+f +vk++++ Pd.00g1186340.m01 64 F-SQRLRIPPKFIENFNGQ--SLRKCALRGPSRQWWDVKL--EERENSLFFRDGWQGFVKDHVLEVGDLLVFSYNGKSKF--KVKIYDR 145 4.467********999888..4568***************..********************************998999..9999987 PP | |||||||
2 | B3 | 37.7 | 3.7e-12 | 240 | 311 | 14 | 88 |
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 r+++p++ a + g+ + ++l+d++grsW v+l+ +++r ++ GW e kan++ gD+++F+l++++ Pd.00g1186340.m01 240 YRVTIPNELAVAEGLRRRD--AVMLQDPTGRSWLVELR-VESRNRLDMAIGWTECRKANQISPGDSIIFELVKQE 311 4789******999988544..7***************5.4555669999*********************98754 PP | |||||||
3 | B3 | 50.5 | 3.8e-16 | 328 | 415 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 ffkvl + ++ l+lp f+e+ +g++ + + l+ ++g+ W+v+l + + +++++ +GW++F++++ L+ g f+vF +dg+s+f Pd.00g1186340.m01 328 FFKVL--LGDFYQN-LRLPPVFIEKLDGQS-LP-KCALRGPNGKLWTVEL--EERENGFFFHDGWQGFARDHCLEIGNFLVFDYDGDSKF-- 410 56666..5555555.9**********8873.44.89**************..**********************************9999.. PP EEEEE CS B3 93 vvkvf 97 v+++ Pd.00g1186340.m01 411 DVTIY 415 66655 PP | |||||||
4 | B3 | 50.9 | 2.8e-16 | 508 | 585 | 16 | 96 |
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEET.TEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkks.gryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 +++pk+ a + g++ ++kt++l+d+ grsW vkl++ +++ +r+ +tkGW + ++an++ +gD++vF++++ s + +++ Pd.00g1186340.m01 508 VTIPKELAIAEGLV--RKKTVKLQDPAGRSWIVKLRVHRSPyQRFDMTKGWAKCCRANQISQGDTIVFEFVKPSV--MQIHI 585 589*****999999..6779***************985555156*************************876433..35555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 607 aa Download sequence |
MAEARKQVKV RTAKQDQSLK YLNLWQQNSE NKTWLVLLTK IQMARPRKRS PKKPSFFKIL 60 IGDFSQRLRI PPKFIENFNG QSLRKCALRG PSRQWWDVKL EERENSLFFR DGWQGFVKDH 120 VLEVGDLLVF SYNGKSKFKV KIYDRSACEK NVEVAERRSG SPVPLVNKGN QAQVKDEIVE 180 LDSEDCENKT IDSDRRSCKY PISEKRPVSF CVQETSTGSI LFKSENPCFL VCSMKQHLLY 240 RVTIPNELAV AEGLRRRDAV MLQDPTGRSW LVELRVESRN RLDMAIGWTE CRKANQISPG 300 DSIIFELVKQ EAQMARKPSK PSLKKQSFFK VLLGDFYQNL RLPPVFIEKL DGQSLPKCAL 360 RGPNGKLWTV ELEERENGFF FHDGWQGFAR DHCLEIGNFL VFDYDGDSKF DVTIYEPTGC 420 EKDVEAAKRR NGNPVSSVKD EIVDIETENY NKESKSKTIN AERTSRKYVM SGKRPANDCV 480 EETSTGSILF KSENSCFIKI LTNILYPVTI PKELAIAEGL VRKKTVKLQD PAGRSWIVKL 540 RVHRSPYQRF DMTKGWAKCC RANQISQGDT IVFEFVKPSV MQIHIYRGGR VGGSGCSVVL 600 VNPGLKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66980.1 | 2e-26 | B3 family protein |