PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1140520.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ARR-B | ||||||||
Protein Properties | Length: 1135aa MW: 126410 Da PI: 7.7215 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 77.2 | 2.2e-24 | 210 | 263 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp+++Wt+ LH++F+ a++++ G +kA+Pk+ile+m+v+gLt+e+v+SHLQkYR+ Pd.00g1140520.m01 210 KPKVVWTNSLHNQFLLAIKHI-GLDKAVPKRILEFMNVPGLTRENVASHLQKYRI 263 79*******************.********************************6 PP | |||||||
2 | Myb_DNA-binding | 26.5 | 1.5e-08 | 213 | 262 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT ++ +++ a+k G + +k+I + m+ g+t++++ s++qky+ Pd.00g1140520.m01 213 VVWTNSLHNQFLLAIKHIGLDkaVPKRILEFMNvPGLTRENVASHLQKYR 262 68***********************************************7 PP | |||||||
3 | Response_reg | 75.5 | 2e-25 | 27 | 135 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedaleal 90 +l+vdD+ + + ++ +l+ y +v +++++ +al++l++++ +Dl+++D+ mp+m+G+el k+ +ee klp+i+++a ++e+ +l+ l Pd.00g1140520.m01 27 ILVVDDDATTLAIVSAMLKTWSY-QVVSVRNPIDALATLRARKgiFDLVVTDLHMPQMNGFELQKHVHEEF-KLPVIMMSADDKESVILKSL 116 89*********************.9999***********99999*************************99.******************** PP HTTESEEEESS--HHHHHH CS Response_reg 91 kaGakdflsKpfdpeelvk 109 + G+ +++Kp++++++ + Pd.00g1140520.m01 117 EGGVVYYIVKPVSKDDIKN 135 ***************9976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1135 aa Download sequence |
MDAATERSEF RQSSANTKPS FVDMINILVV DDDATTLAIV SAMLKTWSYQ VVSVRNPIDA 60 LATLRARKGI FDLVVTDLHM PQMNGFELQK HVHEEFKLPV IMMSADDKES VILKSLEGGV 120 VYYIVKPVSK DDIKNVWQYA VAAKKGKSVT IEEIESAPGE APGEVEDGSS ETSSDTDEEK 180 QEKKAEAKVK KERKRHREDD NEERMVAPKK PKVVWTNSLH NQFLLAIKHI GLDKAVPKRI 240 LEFMNVPGLT RENVASHLQK YRIFLKRVAE KARLSKCLSE RVFRSSFALG HPALVFNNVQ 300 RDQYYSQLLN PQQMGTSIAS TFQPSAGNGN TLALTAAASN NLGSIQFPNY HQSSSSNSSR 360 SFPQLIGSGQ LPLLSNNQAN ILCQQPMLGN GNGDQLLCQA NSRTAAFGVQ QLMNTFGNGG 420 MSFGLTNNNF GLTNNNIGTN SLMQVHPQQS QPRQNRVFTF TNNPFSYNFA TSGNQISSSY 480 TPLSSSFENM GSTVNNVNQR VPNSSHQLVS NFAGSQIMSS SGRELVGLMG SQPAGMLNNI 540 TNINIGGGYP NVSLTGAPIG NNNGIFNSGY MAQLGASSSS MSSSAGFEIN ASSAYQFPPS 600 LLKNNGDDQQ QNVPVLPPSA GNINDQCGLA NMNVGGGNVE NSHSGVMDNT ITTDAPPTLI 660 NNNNISHEQE LVGDIDDLML SNLFMDQQNY EPSPPPFQQQ QEGGDQQVVN PEFDGNVFDS 720 EDYSILFDPE HPFQDCDDDF LNAILDSDMV RGSVAFISSS VKEKKMRPIF CGNFEYDARQ 780 NELERLFGRY GKVDRVDMKS GFAFIYMEDE RDAEYAIRGL DRKEFGRKGR RLRVEWTKVA 840 NHERGTIRPG ASRRSSTNTR PSKTLFVINF DPYHTRTKDL ERHFDPYGKI VSVRIRRNFA 900 FVQYESQEDA TRALEATNMS KLMDRVISVE YAVRDDDERR DGFSPDRRSR DRSLDRGRDR 960 RRSPSPYKRE RGSPDYGRGP SPGPYRRERG SPDYGRGPSP YRRERVSPDY GRGRSPSPYR 1020 RERSDHGRIS SRSPRKERRD RDSPENGAIE SPYKRDRGSP ENGAIQSPYK RDRSSPENGR 1080 GPSSSPYERE RVSPEHGHGP SPNSVPEARG DSPNYGGPES PMQERYSSRS PQAEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 3e-55 | ARR-B family protein |