PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1131270.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 622aa MW: 68039.1 Da PI: 9.9626

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1131270.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	41.3	3.8e-13	266	320	6	55
AP2 6 VrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 Vr+++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g Pd.00g1131270.m01 266 VRRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 320 9*************988886678446***********************98 PP
2	AP2	49.9	8e-16	365	414	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+fgt eeAa+a++ a+ k++g Pd.00g1131270.m01 365 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFGTQEEAAEAYDIAAIKFRG 414 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
MLVLGQAPSG ALSARRCSLS SPPQFTNPNP PLFSNRKPRF ASKANPLKSL NITLAKADGG 60 IDSTSAPTKQ ALSSSPAPPP PPSLDNDQPI FVGQENIPLE GVIQFEKPSS SSRLRKWGRV 120 ALLAGGDVLA LLTFAAIGRF SHGFSVFEFE TLRTADPFIA GWFLSAYFLG GYGKDGRGVN 180 GQSKALTATA KSWALGIPLG IIIRASTAGH LPPYKFILIT MGSTAVLLLG WRALLYKFLP 240 GDKSKKSDVY RRGSPFELFE LLTSLVRRHR WTGRYEAHLW DNSCKKEGQT RKGRQVYLGG 300 YDMEEKAARA YDLAALKYWG SATHINFPLE NYTAQLEEMK NMSRQEYVAH LRRKSSGFSR 360 GASMYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFGTQEE AAEAYDIAAI KFRGVNAVTN 420 FDITRYDVEK IMASNTLLAG EFARRTKEIE PNIEANAIEY NPSAQNNGEA NQPEINNGNG 480 LDWKMALYQS AQEQPTSCVQ TVDQKSIGSL NYRHPSFSMA LQDLIGVESV NSSQPLMDES 540 AKVGAHFSNP SSLVTSLSSS REASPDKSGP NMLFAKPPLA SKFICPTSAA AAAVSSWFPT 600 AQLRPTAISM SHLPLFAAWN DT

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

MLVLGQAPSG ALSARRCSLS SPPQFTNPNP PLFSNRKPRF ASKANPLKSL NITLAKADGG  60
IDSTSAPTKQ ALSSSPAPPP PPSLDNDQPI FVGQENIPLE GVIQFEKPSS SSRLRKWGRV  120
ALLAGGDVLA LLTFAAIGRF SHGFSVFEFE TLRTADPFIA GWFLSAYFLG GYGKDGRGVN  180
GQSKALTATA KSWALGIPLG IIIRASTAGH LPPYKFILIT MGSTAVLLLG WRALLYKFLP  240
GDKSKKSDVY RRGSPFELFE LLTSLVRRHR WTGRYEAHLW DNSCKKEGQT RKGRQVYLGG  300
YDMEEKAARA YDLAALKYWG SATHINFPLE NYTAQLEEMK NMSRQEYVAH LRRKSSGFSR  360
GASMYRGVTR HHQHGRWQAR IGRVAGNKDL YLGTFGTQEE AAEAYDIAAI KFRGVNAVTN  420
FDITRYDVEK IMASNTLLAG EFARRTKEIE PNIEANAIEY NPSAQNNGEA NQPEINNGNG  480
LDWKMALYQS AQEQPTSCVQ TVDQKSIGSL NYRHPSFSMA LQDLIGVESV NSSQPLMDES  540
AKVGAHFSNP SSLVTSLSSS REASPDKSGP NMLFAKPPLA SKFICPTSAA AAAVSSWFPT  600
AQLRPTAISM SHLPLFAAWN DT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-108	AP2 family protein