PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1054590.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | AP2 | ||||||||
Protein Properties | Length: 395aa MW: 44654.1 Da PI: 7.6456 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.5 | 2.4e-11 | 70 | 126 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s+n k+k + g ++ +e Aa+a++ a++k++g Pd.00g1054590.m01 70 SRFRGVSRHRWTGRFEAHLWDkLSWNVtqKKKGKQ-GAYDEEESAARAYDLAALKYWG 126 789******************88887784446666.9*******************98 PP | |||||||
2 | AP2 | 52.4 | 1.4e-16 | 169 | 220 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g Pd.00g1054590.m01 169 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 220 89****99**********99966...3.6*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 395 aa Download sequence |
MERMMVKNEE NPGRRRQSTA DRETEATRSV KRRRRDPPAV AVSCDNKQSE QQLPQKPADP 60 TSATTMKRSS RFRGVSRHRW TGRFEAHLWD KLSWNVTQKK KGKQGAYDEE ESAARAYDLA 120 ALKYWGTSTF TNFPISDYEK ETEIMQTVSK EEYLASLRRR SSGFSRGVSK YRGVARHHHN 180 GRWEARIGRV FGNKYLYLGT YSTQEEAARA YDIAAIEYRG INAVTNFDLS SYIRWLKPTA 240 DDPIATQEPE TVAEPQNMPF MANSYISPGE SFSHTNPFAS DYFTSPRKQE VIGSKSSSPT 300 ALGLLLQSSI FRELVQKNSN FSEDESTDGE ETKNQPQVGS DDEFGGIFYD GIGNNPFDCS 360 SNSDGDNNPW SSITSTILLN QPTKANASDS LFFFS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 14 | 35 | RRRQSTADRETEATRSVKRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.3 | 2e-79 | AP2 family protein |