PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1024940.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 300aa    MW: 34096 Da    PI: 9.2398
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1024940.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3543.1e-17241031299
                        HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                 B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        +   l++p  f+++++g   + ++ +l+ +sg+   v+l  + + ++ +++kGW++Fvk+++L++g f+vF++dg+s+f  +v+++++
  Pd.00g1024940.m01  24 S--HLRIPPAFIKNFNGG--SLRKCSLRGPSGKGRAVEL--EERENGLFFSKGWQGFVKDHHLEVGNFLVFRYDGESKF--KVTIYDR 103
                        3..399******888555..45589**************..**********************************9999..8988887 PP
2B350.15.1e-162002781494
                        T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                 B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                         +l++pkk a + g  +++   +tl+d++gr W vkl +  + + +r+ +t+GW e ++an++ +gD++vF+++++s     +
  Pd.00g1024940.m01 200 YCLMIPKKLAIAEGFTSAR--NVTLQDPNGRLWLVKLVIrpKTSCKRVEFTTGWGECCQANQISVGDTMVFEFVKQSAI--QL 278
                        349*******888877555..7***************8777777788*************************9876555..44 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MARKLMKRSV KKESFFKILL GDFSHLRIPP AFIKNFNGGS LRKCSLRGPS GKGRAVELEE  60
RENGLFFSKG WQGFVKDHHL EVGNFLVFRY DGESKFKVTI YDRSACEKDV EVAQRGIGSS  120
DSIESKGNQV RVKEEIIDLE TENYNEDYEN KTSITNRRNG NAMSGKKPTT EYVEETSSEC  180
ISFKSDHRCF METMKRHYRY CLMIPKKLAI AEGFTSARNV TLQDPNGRLW LVKLVIRPKT  240
SCKRVEFTTG WGECCQANQI SVGDTMVFEF VKQSAIQLHI FGAVNGKRCP VVLDAPTGEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.13e-20B3 family protein