PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1024930.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 294aa    MW: 33281.3 Da    PI: 9.3682
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1024930.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.48.3e-1615102197
                        EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                        ffkvl     + ++ l+lp  f+e+ +g++  + +  l+ ++g+ W+v+l  + + +++++ +GW +Fv+++ L+ g f+vF +dg+s+f  
  Pd.00g1024930.m01  15 FFKVL--LGDFYQH-LRLPPVFIEKLDGQS-LP-KCALRGPNGKLWTVEL--EERENGFFFHDGWLGFVRDHCLEIGNFLVFDFDGDSKF-- 97 
                        66666..6666666.9**********8873.44.89**************..**********************************9999.. PP

                        EEEEE CS
                 B3  93 vvkvf 97 
                         v+++
  Pd.00g1024930.m01  98 DVTIY 102
                        66665 PP
2B350.24.8e-161952721696
                        EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEET.TEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                 B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkks.gryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                        +++pk+ a + g++   +kt++l+d+ grsW vkl++ +++ +r+ +tkGW + ++an++ +gD++vF++++ s   + +++
  Pd.00g1024930.m01 195 VTIPKELAIAEGLV--WKKTVKLQDPAGRSWIVKLRVHRSPyQRFDMTKGWANCCRANQISQGDTIVFEFVKPSV--MQIHI 272
                        689****9999999..4569***************985555156*************************876433..35555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MARKLSKPSL KKQSFFKVLL GDFYQHLRLP PVFIEKLDGQ SLPKCALRGP NGKLWTVELE  60
ERENGFFFHD GWLGFVRDHC LEIGNFLVFD FDGDSKFDVT IYEPTGCEKD VEAAKRRNGN  120
PVSSVKDEIV DIETENYNKE SKSKTINAER TSRKYVMSGK RPANDCVEET STGSILFKSE  180
NSCFIKILTK TLYPVTIPKE LAIAEGLVWK KTVKLQDPAG RSWIVKLRVH RSPYQRFDMT  240
KGWANCCRAN QISQGDTIVF EFVKPSVMQI HIYRGGRVGG SGCSVVLVNP GLKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.12e-27B3 family protein