PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1008760.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 590aa MW: 65126.8 Da PI: 4.8949

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1008760.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	64.7	1.7e-20	116	169	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r +W + L e+F+ a++++ G ++AtPk+ile+m+ ++Lt+++v+SHLQkYR+ Pd.00g1008760.m01 116 KKRCEWKKSLGEKFMLAITHI-GLDNATPKRILEFMNEPDLTIKNVASHLQKYRI 169 689****************.******************************7 PP
2	Myb_DNA-binding	21.6	5.2e-07	118	168	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W + + e++ a++ G + t+k+I + m+ +t k++ s++qky+ Pd.00g1008760.m01 118 RCEWKKSLGEKFMLAITHIGLDnaTPKRILEFMNePDLTIKNVASHLQKYR 168 568999********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 590 aa Download sequence
MASKSVLIVA LLFSVLILCL QGTYADRIQG WEGGHARFYG GAGAFASGAI GGGFGNGNWD 60 SQGYGFSSGS CYELKCDSGP IWCLTGDEEK QEKRAKRGRK RSREGDDEER TAAPRKKRCE 120 WKKSLGEKFM LAITHIGLDN ATPKRILEFM NEPDLTIKNV ASHLQKYRIY LKQLKVGVAG 180 DEDMRERLRR SSFALGHLEL FFNNNERDLH HSQLLKQQQM GTSIGSTFQP SAGIGSTLPL 240 TAAASNSHGS IQFSNDQQSS TSNSSRSIPQ LIGSGQSSLL NNNPANFLRQ QPTLGNRNGD 300 QLFCQENRPA AFGMQQPSNN FENGGMSFDP MNNVGLTNNN IGTKNLMQVY PLQSQPGTNN 360 PFSYNLATSV NQNGSNFTPM SASFDNLGSH FNDVNQFGVY WQSLCSAVFE TGASSAYQFP 420 PNLPNNKGDL DQQQNIPVLP PPEGNINDQC GLPNINVGGG NVENSNRYLH DIFMMPDYLF 480 TDEQDNYHQP PSQQQDGGHD QLPYQVEVQD PAANQVPNLS ADQVPNPGPY HVEDNAPNET 540 ISEPGMPTLF ELEGNNTRFS YLSEHIWDGD IWEDADIWDA INQFDINKGR

Sequence ? help Back to Top

Protein Sequence Length: 590 aa Download sequence

MASKSVLIVA LLFSVLILCL QGTYADRIQG WEGGHARFYG GAGAFASGAI GGGFGNGNWD  60
SQGYGFSSGS CYELKCDSGP IWCLTGDEEK QEKRAKRGRK RSREGDDEER TAAPRKKRCE  120
WKKSLGEKFM LAITHIGLDN ATPKRILEFM NEPDLTIKNV ASHLQKYRIY LKQLKVGVAG  180
DEDMRERLRR SSFALGHLEL FFNNNERDLH HSQLLKQQQM GTSIGSTFQP SAGIGSTLPL  240
TAAASNSHGS IQFSNDQQSS TSNSSRSIPQ LIGSGQSSLL NNNPANFLRQ QPTLGNRNGD  300
QLFCQENRPA AFGMQQPSNN FENGGMSFDP MNNVGLTNNN IGTKNLMQVY PLQSQPGTNN  360
PFSYNLATSV NQNGSNFTPM SASFDNLGSH FNDVNQFGVY WQSLCSAVFE TGASSAYQFP  420
PNLPNNKGDL DQQQNIPVLP PPEGNINDQC GLPNINVGGG NVENSNRYLH DIFMMPDYLF  480
TDEQDNYHQP PSQQQDGGHD QLPYQVEVQD PAANQVPNLS ADQVPNPGPY HVEDNAPNET  540
ISEPGMPTLF ELEGNNTRFS YLSEHIWDGD IWEDADIWDA INQFDINKGR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	99	118	RKRSREGDDEERTAAPRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	2e-19	ARR-B family protein