PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g064350.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 478aa MW: 52883.2 Da PI: 4.9552

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g064350.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.2	1.9e-33	253	307	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv++Lt++hvkSHLQkYR+ Pd.00g064350.m01 253 KARMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVESLTIYHVKSHLQKYRT 307 68****************************************************8 PP
2	Myb_DNA-binding	54.4	2.9e-17	255	306	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k + + m + +t +++ks++qky+ Pd.00g064350.m01 255 RMRWTPELHEAFVEAVNQLGGSeraTPKGVLKLMKvESLTIYHVKSHLQKYR 306 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MSSSLPVLPT PMEETYPKLP DSQQVSMERE LMTRPVVHAG HLTSNSGVVG HIFSSSSGFS 60 TDLHYSAPSP HEKQPKNNPF ISQSSSSVSL QLPHSSHSGF LQSTSSCPYS KENSGSWCTD 120 SLPGFLDFPV NNHIENSQVE SSSCSGIMPA EEFVKRSDWQ EWADQLITDD DALTSNWNEL 180 LVDNNVTDLE PKIKYQVPKP SSNFSAQQPQ VQQQQPAPSG EIIPAPSREL IPAPSREIIS 240 VTAPSSANSA PAKARMRWTP ELHEAFVEAV NQLGGSERAT PKGVLKLMKV ESLTIYHVKS 300 HLQKYRTARY RPESSEGSSE KKLTPIEEMT SLDLKTGIEI TEALRLQMEV QKRLHEQLEI 360 QRNLQLRIEE QGKYLQMMFE KQCKTGIDTL KASSLNLDDP ADPLDAMQAC PDKSELEPSK 420 VDLGKTETDP VKANTKSEEG SLELSGKQKV PETEAPEDPE LDVSVSSSQP PKRPKIKE

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MSSSLPVLPT PMEETYPKLP DSQQVSMERE LMTRPVVHAG HLTSNSGVVG HIFSSSSGFS  60
TDLHYSAPSP HEKQPKNNPF ISQSSSSVSL QLPHSSHSGF LQSTSSCPYS KENSGSWCTD  120
SLPGFLDFPV NNHIENSQVE SSSCSGIMPA EEFVKRSDWQ EWADQLITDD DALTSNWNEL  180
LVDNNVTDLE PKIKYQVPKP SSNFSAQQPQ VQQQQPAPSG EIIPAPSREL IPAPSREIIS  240
VTAPSSANSA PAKARMRWTP ELHEAFVEAV NQLGGSERAT PKGVLKLMKV ESLTIYHVKS  300
HLQKYRTARY RPESSEGSSE KKLTPIEEMT SLDLKTGIEI TEALRLQMEV QKRLHEQLEI  360
QRNLQLRIEE QGKYLQMMFE KQCKTGIDTL KASSLNLDDP ADPLDAMQAC PDKSELEPSK  420
VDLGKTETDP VKANTKSEEG SLELSGKQKV PETEAPEDPE LDVSVSSSQP PKRPKIKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-109	G2-like family protein