PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g053970.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 607aa MW: 69697.2 Da PI: 9.9818 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 60.6 | 2.7e-19 | 64 | 145 | 11 | 99 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + s+rl++p kf+e+++g+ + ++ l+ +s + W+vkl + + ++ ++++GW++Fvk++ L++gD +vF+++g+s+f +vk++++ Pd.00g053970.m01 64 F-SQRLRIPPKFIENFNGQ--SLRKCALRGPSRQWWDVKL--EERENSLFFRDGWQGFVKDHVLEVGDLLVFSYNGKSKF--KVKIYDR 145 4.467********999888..4568***************..********************************998999..9999987 PP | |||||||
2 | B3 | 38.9 | 1.5e-12 | 241 | 312 | 15 | 89 |
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 r+++p++ a + g+ + ++l+d++grsW v+l+ +++r ++ GW e kan++ gD+++F+l++++ Pd.00g053970.m01 241 RVTIPNELAVAEGLRRRD--AVMLQDPTGRSWLVELR-VESRNRLHMAIGWTECRKANQISPGDSIIFELVKQEA 312 789******999988544..7***************5.44555677899********************997543 PP | |||||||
3 | B3 | 50.5 | 3.9e-16 | 328 | 415 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 ffkvl + ++ l+lp f+e+ +g++ + + l+ ++g+ W+v+l + + +++++ +GW++Fv+++ L+ g f+vF +dg+s+f Pd.00g053970.m01 328 FFKVL--LGDFYQH-LRLPPVFIEKLDGQS-LP-KCALRGPNGKLWTVEL--EERENGFFFHDGWQGFVRDHCLEIGNFLVFDFDGDSKF--D 411 66666..6666666.9**********8873.44.89**************..**********************************9999..6 PP EEEE CS B3 94 vkvf 97 v+++ Pd.00g053970.m01 412 VTIY 415 6655 PP | |||||||
4 | B3 | 51.1 | 2.4e-16 | 508 | 585 | 16 | 96 |
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEET.TEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkks.gryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 +++pk+ a + g++ ++kt++l+d+ grsW vkl++ +++ +r+ +tkGW + ++an++ +gD++vF++++ s + +++ Pd.00g053970.m01 508 VTIPKELAIAEGLV--RKKTVKLQDPAGRSWIVKLRVHRSPyQRFDMTKGWAKCCRANQISQGDTIVFEFVKPSV--MQIHI 585 68******999999..6779***************985555156*************************876433..35555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 607 aa Download sequence |
MAEARKQVKV RTAKQDQSLK YLNLWQQKSE NKTWLVLLTK IQMARPRKRS PKKPSFFKIL 60 IGDFSQRLRI PPKFIENFNG QSLRKCALRG PSRQWWDVKL EERENSLFFR DGWQGFVKDH 120 VLEVGDLLVF SYNGKSKFKV KIYDRSACEK NVEVAERRSG SPVPLVNKGN QAQVKDEMVE 180 LDTEDCENKT IDSDRRSCKD PISEKRPVSF CVQETSTGSI LFKSENPCFL VCSRKQHLLY 240 RVTIPNELAV AEGLRRRDAV MLQDPTGRSW LVELRVESRN RLHMAIGWTE CRKANQISPG 300 DSIIFELVKQ EARMARKLSK PSLKKQSFFK VLLGDFYQHL RLPPVFIEKL DGQSLPKCAL 360 RGPNGKLWTV ELEERENGFF FHDGWQGFVR DHCLEIGNFL VFDFDGDSKF DVTIYEPTGC 420 EKDVEAAKRR NGNPVSSVKD EIVDIETENY NKESKSKTIN AERTSRKYVM SGKRPANDCV 480 EETSTGSILF KSENSCFIKI LTKTLYPVTI PKELAIAEGL VRKKTVKLQD PAGRSWIVKL 540 RVHRSPYQRF DMTKGWAKCC RANQISQGDT IVFEFVKPSV MQIHIYRGGR VGGSECSVVL 600 VNPGLKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66980.1 | 1e-26 | B3 family protein |