PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g045430.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 356aa    MW: 39542.2 Da    PI: 6.4214
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g045430.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B377.21.7e-24149247196
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k+lt sd++++g +++p++ ae+        ++++ s++l+++d++ +sW++++iyr++++r++lt+GW+ Fv a++L++gD+v+F +  +
  Pd.00g045430.m01 149 FCKTLTASDTSTHGGFSVPRRAAEKLfppldfTMQPP-SQELVVRDLHDNSWTFRHIYRGQPKRHLLTTGWSLFVGAKRLRAGDSVLFIR--D 238
                       99*********************999*****955554.459************************************************4..4 PP

                       SEE..EEEE CS
                B3  88 sefelvvkv 96 
                       ++ +l+++v
  Pd.00g045430.m01 239 EKSQLMIGV 247
                       666678887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MIMGSVEEKI KAGGLLRGAQ SSILDEMKLL KELQDHSGSR KAINSELWHA CAGPLVCLPQ  60
VGSLSYYFPQ GHSEQVAVST KRTATSQIPN YPNLPSQLLC QVQNVTLHAD KETDEIYAQM  120
SLKPVNSEKD VFPVPDFGLK PSKHPSEFFC KTLTASDTST HGGFSVPRRA AEKLFPPLDF  180
TMQPPSQELV VRDLHDNSWT FRHIYRGQPK RHLLTTGWSL FVGAKRLRAG DSVLFIRDEK  240
SQLMIGVQKT GSVGRSIDVT SFKNYEELCL AIECMFGLEG LLNDPRGSGW KLVYVDYEND  300
VLLVGDDPWE EFVGCVRCIR ILSPTEVQQM SEEGMKLLNS AAMQGINGTM SEGGRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19850.11e-141ARF family protein