PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001900.1_g290.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 188aa MW: 20512.7 Da PI: 10.3592 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.5 | 7.8e-19 | 61 | 111 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrd ++ +r++lg+f taeeAa a+++a+ +++g Pav_sc0001900.1_g290.1.mk 61 HYRGVRRRP-WGKYAAEIRD----SaRHgARVWLGTFSTAEEAALAYDRAAFRMRG 111 8********.**********....33236*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MVSASTQNEL PLNENDSQDM VIYQVLNEAR AINPSFLPQR HQMNHQPNGL EPSNKNIGKK 60 HYRGVRRRPW GKYAAEIRDS ARHGARVWLG TFSTAEEAAL AYDRAAFRMR GTKALLNFPP 120 DVVAASSSPS SSIHRVRPSF SVPSSSNSNS TTSDSSGSSS LLSIGTPRSE SQSNTSNVEA 180 QNMQGPII |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47220.1 | 1e-30 | ERF family protein |