PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001077.1_g300.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 598aa MW: 64831.5 Da PI: 6.3915

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001077.1_g300.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97	1.2e-30	324	382	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ Pav_sc0001077.1_g300.1.mk 324 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGNHNHP 382 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 598 aa Download sequence
MDMDASTIHQ RSPPPPPLPP PTLQFSVNLN CTHEDVDNHH HHHHHHHQHS PEPPSNEKRK 60 VIDERDFFAD NKSHVDQDKS ASADPADKMD LHGPTDMEFN VNTGLNLLLT NTSSDQSVVD 120 DGISSNIEDK RVKSELAVLQ AELERMNAEN QRLRGMLNQV TTNYNALQVH LLTLMQSQKA 180 EQNSSAAEGD GVFDGNNKVV VEEKKLINGN GSPVVVPRQF MDLGLAANNA DTDEPSQSSS 240 EERSRERSGS LGENVKVAGH SDDQEKKEFG RGIGREESPD QPSQSWGPNK VPRLNSPKEV 300 DQTEATMRKA RVSVRARSEA PMITDGCQWR KYGQKMAKGN PCPRAYYRCT MAAGCPVRKQ 360 VQRCAEDRTI LITTYEGNHN HPLPPAAMAM ASTTSSAARM LLSGSMPSAD GLMDSNFLTR 420 TILPCSSSVA TISASAPFPT VTLDLTQSPN PLQLQRPPGQ FNIPFPNPSQ NFTNGPVSLL 480 PQIFGQALYN QSKFSGLQMS QDMERAQLGH QQQPGHQGQQ QNSLADTVTA ATAAIAADPN 540 FTAALAAAIT SIIGNAHPNN NSNNGTNPAT NSNNNNGNGN GNATSNNNKL SNSSFSAN

Sequence ? help Back to Top

Protein Sequence Length: 598 aa Download sequence

MDMDASTIHQ RSPPPPPLPP PTLQFSVNLN CTHEDVDNHH HHHHHHHQHS PEPPSNEKRK  60
VIDERDFFAD NKSHVDQDKS ASADPADKMD LHGPTDMEFN VNTGLNLLLT NTSSDQSVVD  120
DGISSNIEDK RVKSELAVLQ AELERMNAEN QRLRGMLNQV TTNYNALQVH LLTLMQSQKA  180
EQNSSAAEGD GVFDGNNKVV VEEKKLINGN GSPVVVPRQF MDLGLAANNA DTDEPSQSSS  240
EERSRERSGS LGENVKVAGH SDDQEKKEFG RGIGREESPD QPSQSWGPNK VPRLNSPKEV  300
DQTEATMRKA RVSVRARSEA PMITDGCQWR KYGQKMAKGN PCPRAYYRCT MAAGCPVRKQ  360
VQRCAEDRTI LITTYEGNHN HPLPPAAMAM ASTTSSAARM LLSGSMPSAD GLMDSNFLTR  420
TILPCSSSVA TISASAPFPT VTLDLTQSPN PLQLQRPPGQ FNIPFPNPSQ NFTNGPVSLL  480
PQIFGQALYN QSKFSGLQMS QDMERAQLGH QQQPGHQGQQ QNSLADTVTA ATAAIAADPN  540
FTAALAAAIT SIIGNAHPNN NSNNGTNPAT NSNNNNGNGN GNATSNNNKL SNSSFSAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-116	WRKY family protein