PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001015.1_g060.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 229aa    MW: 25480.4 Da    PI: 8.6466
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001015.1_g060.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.3e-18655255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                               +++GVr++  +g+Wv+eIr+p        +r++lg+f tae Aa+a+++a+  ++g
  Pav_sc0001015.1_g060.1.mk  6 KFRGVRQRQ-WGSWVSEIRHP-----LlkRRVWLGTFETAEAAARAYDQAAILMNG 55
                               89****999.**********8.....334**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MVQSRKFRGV RQRQWGSWVS EIRHPLLKRR VWLGTFETAE AAARAYDQAA ILMNGQNAKT  60
NFPTSNNNNN NNNSSGQDTK PTDQDSPWSP KALSELLNSK LRKCCKDPSP SLTCLRLDND  120
NSHIGVWQKR PAGSRASSNW VMRIELGKKK KHISDHQDGF MCSSSSSSSS PSSFSSSTSS  180
SMVGLIEAGM SEADQDEEDK LAMQMIEELL NWNYPIPSPT SNVQEGNII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11190.12e-64ERF family protein