PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000254.1_g260.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 287aa    MW: 32392.3 Da    PI: 4.6394
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000254.1_g260.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.4e-1994145156
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                ++++GVr+++ +grW+AeIrdp++   r+r++lg+f+taeeA  a+++a+ +++g+
  Pav_sc0000254.1_g260.1.mk  94 KKFRGVRQRR-WGRWAAEIRDPTS---RTRVWLGTFDTAEEAGLAYDRAAIAFKGH 145
                                59*****998.**********965...4**********************999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MNRTKYTEHR NITTKLVNHF PESNVVAPKI VRISVTDGDA TDSSGDEAED RIVVKRTINE  60
IRIEECSAPR LFSKPKAPRC RANDESNKVS PKGKKFRGVR QRRWGRWAAE IRDPTSRTRV  120
WLGTFDTAEE AGLAYDRAAI AFKGHLAFTN FIKPPEIAVP ATPDYDCKPI SWETSPTVAV  180
IGECDHSLRS PTSVLSPGEA EIEWRPVGIS ERDDFGAFES EFLLNDCFEP EAPAPIFFDE  240
MRVVPEMLLK DEDFSDLSLD FRSCKWDDVE DYFEGACDQS GAPCCFE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.19e-40ERF family protein