PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02657.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 640aa    MW: 72995.4 Da    PI: 10.1914
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02657.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.64e-171699998
                HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                  ++s  + +p +f++++ +    +k  +++d sg+ W+v l     ++  ++++GW+eF++++ L+ gDf+vFk+ ++s f   vk+f 
  POO02657.1 16 PKFSSEKMGIPTSFVRKYILR--VPKLAVVKDGSGKCWQVSL--VTIGKNLYIGTGWEEFARDHSLERGDFLVFKYYKTSLF--EVKIFG 99
                46778889**********666..35579**************..77777899***********************9988888..888876 PP
2B340.26e-13204295699
                 ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE..E-SS.SEE..EEEEE-S CS
          B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk..ldgr.sefelvvkvfrk 99 
                 ++ + ++++ +++p+  ++e ++k+     +tl+d++++ W v++ + k ++++ +++GW eF ++n+Lk +D +vF+  l ++  ++e +v+v+r+
  POO02657.1 204 ITDSETSKSGVYIPRAIMSETKMKP----NVTLRDQNNKLWPVEILFLKFGRGF-IKGGWPEFRSENNLKLNDKCVFEpvLGDEnVCREIKVRVIRR 295
                 4555666667********9998775....6***************999998885.899********************7644445889999998886 PP
3B351.51.8e-16387476198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 ff v+     ++s+ + +p  f+++++  ++ + + +++d sg+ We+ l    + +  ++++GW+eF+++  L++gDf+vFk++g s f   v +f 
  POO02657.1 387 FFRVF--IPEFSSKHMLIPPAFVRRFM--PTIPEKAVVKDGSGKCWEFGL--VTSEKDLYFATGWEEFARELFLETGDFLVFKYNGISLF--EVEIFG 476
                 55666..445666669**********7..567889***************..888889**************************987777..777766 PP
4B332.71.4e-105666183386
                 -SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.S CS
          B3  33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.g 86 
                 + ++ l+  + + W +k++++k + r++lt+GW++F k+n+L+++D + ++l+ g
  POO02657.1 566 P-DVNLRCHKDKLWPMKISFWKDG-RCYLTTGWSKFQKENKLEAKDKCELELVlG 618
                 3.79999999***********996.889*********************997632 PP
Sequence ? help Back to Top
Protein Sequence    Length: 640 aa     Download sequence    
MAFSDDVPEF FRIFIPKFSS EKMGIPTSFV RKYILRVPKL AVVKDGSGKC WQVSLVTIGK  60
NLYIGTGWEE FARDHSLERG DFLVFKYYKT SLFEVKIFGA NGCKKQVASP QILAQVKIED  120
EEEQTHTKSS QALEQTRIEE RGLNGSTRKS GSSEEISQGK ISRKVAKTSL NEQRKVAKTS  180
LNEQRTPRPA KHIAGKNLHF VANITDSETS KSGVYIPRAI MSETKMKPNV TLRDQNNKLW  240
PVEILFLKFG RGFIKGGWPE FRSENNLKLN DKCVFEPVLG DENVCREIKV RVIRRASKCK  300
AYPSGHWPTK LACATWNSTI CCRLGLHGPQ VDAKKICTFL LGLYKTENQR YSTDKYSLST  360
PLKEVARSKM AGPPRRVSFS NENVPEFFRV FIPEFSSKHM LIPPAFVRRF MPTIPEKAVV  420
KDGSGKCWEF GLVTSEKDLY FATGWEEFAR ELFLETGDFL VFKYNGISLF EVEIFGKNGC  480
KKVVVASPQC LALVKIEEEK TLEEPSNAYN RTQNEEIKGL NGSSKKSSSS RKHVAPKNNH  540
FVVTLTKSRW GLRIPASVRK GIKFKPDVNL RCHKDKLWPM KISFWKDGRC YLTTGWSKFQ  600
KENKLEAKDK CELELVLGKE KICEEIKFQI IRGGARTQKY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.14e-28B3 family protein