PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON97478.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family LFY
Protein Properties Length: 492aa    MW: 55159.9 Da    PI: 6.8958
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON97478.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY358.51.2e-10913161281
     FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseifrl 99 
                 mdp+ f+aslfkwdpr  ++  p+++   + v++a+  +aa+  ar++ +leelf+ayG+ry+tvakiaelGftv tLv+m+deeldd+m+sls+ifr+
  PON97478.1   1 MDPDPFTASLFKWDPRGLVS--PTTVGAPQLVPAAA-YVAASRPAREFGGLEELFQAYGIRYYTVAKIAELGFTVRTLVNMRDEELDDMMNSLSHIFRW 96 
                 9***************8874..44565555555554.677778889999************************************************** PP

     FLO_LFY 100 dllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaags...ggeglgeaelvaaeekkseeekkkaskkkqkr 195
                 +llvGeryGikaavraerrrle++ + ++rr   ++ +++++dalsqeglseepvq+eke++gs   gg+  g++++v+++++++ ++++++ kkkq+r
  PON97478.1  97 ELLVGERYGIKAAVRAERRRLEDDYDFSRRRS--ADTHTNVIDALSQEGLSEEPVQQEKEMVGSgggGGGVGGRWDQVVTAAAERRNNNNNN-KKKQRR 192
                 ***********************887888883..5666779*******************99994443344567877777654444433333.445666 PP

     FLO_LFY 196 kkkkelkse......................ededeeeeededeeg.............sgedge........erqrehPfivtepgevargkknGLDY 251
                 +++k ++s+                      e ++e++++d+de++             +    +        erqrehPfivtepgevargkknGLDY
  PON97478.1 193 RSSKGAHSRvvavdhnnnihelvndmndvaaE-DEEDDDDDDDEDNvvfgkgsgrggssG----TtdhhrmscERQREHPFIVTEPGEVARGKKNGLDY 286
                 66655555578899************999752.333333333333357888877765540....244455666************************** PP

     FLO_LFY 252 LfdLyeqCrefLlqvqkiakerGekcPtkv 281
                 Lf+LyeqCr+fL+qvq+iakerG+kcPtk 
  PON97478.1 287 LFHLYEQCRDFLIQVQNIAKERGDKCPTKL 316
                 *****************************6 PP
2FLO_LFY232.91.6e-71365470281385
     FLO_LFY 281 vtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarq.gwdidavfnahprLsiWYvPtkLrqLC 378
                 vtn+vfryakkagas+inkPkmrhYvhCYalhcLdee snalrra+kergenvGawrqacykplvaiaarq +wdid++fnahprLsiWYvPtkLrqLC
  PON97478.1 365 VTNEVFRYAKKAGASHINKPKMRHYVHCYALHCLDEEGSNALRRAYKERGENVGAWRQACYKPLVAIAARQaAWDIDSIFNAHPRLSIWYVPTKLRQLC 463
                 9******************************************************************987637************************** PP

     FLO_LFY 379 hlerska 385
                 h+er++a
  PON97478.1 464 HAERNAA 470
                 ****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    
MDPDPFTASL FKWDPRGLVS PTTVGAPQLV PAAAYVAASR PAREFGGLEE LFQAYGIRYY  60
TVAKIAELGF TVRTLVNMRD EELDDMMNSL SHIFRWELLV GERYGIKAAV RAERRRLEDD  120
YDFSRRRSAD THTNVIDALS QEGLSEEPVQ QEKEMVGSGG GGGGVGGRWD QVVTAAAERR  180
NNNNNNKKKQ RRRSSKGAHS RVVAVDHNNN IHELVNDMND VAAEDEEDDD DDDDEDNVVF  240
GKGSGRGGSS GTTDHHRMSC ERQREHPFIV TEPGEVARGK KNGLDYLFHL YEQCRDFLIQ  300
VQNIAKERGD KCPTKLIGLL SLLVLKCSVG QWSYFREDYL SVLLFLSFTV SLRHVEPPAL  360
DSLPVTNEVF RYAKKAGASH INKPKMRHYV HCYALHCLDE EGSNALRRAY KERGENVGAW  420
RQACYKPLVA IAARQAAWDI DSIFNAHPRL SIWYVPTKLR QLCHAERNAA VTPSMPTSAT  480
ACPASAAHHL TF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.15e-93LFY family protein