PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON95401.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 225aa    MW: 25680.6 Da    PI: 9.4693
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON95401.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.46.3e-33146204159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ vv++tYeg H+h+
  PON95401.1 146 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHTHP 204
                 59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MENYQMFFPC SSSSMALSAY PSVSSSNMES SHHQAFSGGG SGSGGTNLGL RTHENHHVLM  60
RNDHHQDHDQ AMMMMMMINK AGDHRNISPN QHIINQDHDH HDEQGRSSIS SSAAAGHGHN  120
GKNKKGEKKI RKPKYAFQTR SQVDILDDGY RWRKYGQKAV KNNKFPRSYY RCTHQGCNVK  180
KQVQRLTKDE GVVVTTYEGM HTHPIEKHTD NFEHILNQMQ IYTPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.18e-57WRKY family protein