PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON92869.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | Nin-like | ||||||||
Protein Properties | Length: 932aa MW: 102149 Da PI: 5.1043 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 92.1 | 4.1e-29 | 527 | 577 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ PON92869.1 527 EKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 577 799**********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 932 aa Download sequence |
MSESEEETTP SFPPKSSSSS KEVVPDVREG LMDFDLDLDN PWPMMDQIAF VSNPITGNSN 60 SVAERPAENE ERKIVPSPFL GLVPVDNPNG YYLIKERMTQ ALRYLKDSTD QHVLAQIWAP 120 VKNGCRYVLT TSGQPFVLDP DSNGLHQYRM ASLMYMFSVD GETNEVLGLP GRVFRQKLPE 180 WTPNVQYYSI REYPRLDYAQ HYNVRGSLAL PVFEPSGQSC VGAVNLRSAD ILDHTSTQIC 240 NEGRQNALTE ILEILTAACE TYKLPMAQTW VPCMHRNVLA YGGGMKKNCT SIDGSCMGQV 300 CMSTTELAFY IIDAHMWGFR EACLEHHLQK GQGVAGRAFY SRNLCFCGDI TQFCKTEYPL 360 VHYARMFGLT SCFAVCLQSS HTGNDNYVLE FFLPPSITNA SEQSALLGSL LATMKKHFQS 420 LKVASGIGLE EEGIVELVKV SAIGGLESSL ECIQIPKSAE SPPGPIALPN GGDMVQQDLL 480 TQQLIVDLDT ANVGQDAAHD GGSVNHVSVS ENKETKKTSE RKRGKTEKSI SLEVLQQYFA 540 GSLKDAAKSL GVCPTTMKRI CRQHGISRWP SRKINKVNRS LSKLKRVIES VQGAEGAFGL 600 TPLATSPLPV AVASISRPST SNGTNHQHSP SNIPSEPPME RKDSPTTSSP RREGQVETED 660 QLQGGGVLSQ KEFIHENGGF FSPEINRGSN HSKSGSGSGE ASVGTPTSHG SCQGSPANGS 720 VIVKDPFVYS IHEQCIKVEG SPESAPQPTD ELHFSVPDAL VTAECQEPFG GMLIEDAGSS 780 KDLRNLCPAA DAVLDEPVPE YCWINSTCSD LAPKQTSGVI TQTQPNVIVR LRQEMKNVTI 840 KATYREDIIR FRISLSSNIV ELKDEVAKRL KLELGTFDIK YMDDDQEWVL IACDADLQEC 900 MDVCRSSGSN MIRLLIHDIM PNLGSSCEST EE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24020.1 | 0.0 | Nin-like family protein |