PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON91932.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 593aa MW: 64380.9 Da PI: 6.6182

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON91932.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.7	3.2e-30	342	400	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+a+d +++++tYeg+Hnh+ PON91932.1 342 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQVQRCADDRSILTTTYEGHHNHP 400 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 593 aa Download sequence
MDPAGEELGS PAMRGGDIGR KSWMVGELDF FADKTNLKAK QGVDHHHDDD DDHDQVDKDQ 60 ETGRDHGILQ PDDHDQGLKL ELNTGLFLTT NTSSEKSSTL DDGSSGNVED NKNKPIPNEL 120 AHMQSELDRL NSENHRLRGL LSQIGTDYQI LHMHLSTLSQ RQHNQNLETP ESDHSTKMNM 180 INGSILEENQ RRFVVGSRQF MGIGREKDHE VLHSSLEGRS QNCASGSPQN EIVESMECKS 240 TIISPTGLIN NNKRPPSDST DDDHHQDHDQ GRRGQVLPGR KWVPNKVGRF NNGTASPGAC 300 RENNSNNINN DQHEDPQASE TMSMIRKARV SVRARSDASM ISDGCQWRKY GQKMAKGNPC 360 PRAYYRCTMA TGCPVRKQVQ RCADDRSILT TTYEGHHNHP LPPAAMAMAS TTSAAASMLL 420 SGSMPSGDHP HHHHHQGLNF LPRTAHLPAA CSASLATLSA SAPFPTVTLD LTRTPTSSSD 480 QAILGQRPPF SQGGDNVNSV SLPQILSQNV MSSPQVFGSK SLGLHNQGLL LNSSNPHDLV 540 ASETVSAATA AAITADPNFT AALVAAITSI IGNVKSNNNN TSSVTTRNGS EKN

Sequence ? help Back to Top

Protein Sequence Length: 593 aa Download sequence

MDPAGEELGS PAMRGGDIGR KSWMVGELDF FADKTNLKAK QGVDHHHDDD DDHDQVDKDQ  60
ETGRDHGILQ PDDHDQGLKL ELNTGLFLTT NTSSEKSSTL DDGSSGNVED NKNKPIPNEL  120
AHMQSELDRL NSENHRLRGL LSQIGTDYQI LHMHLSTLSQ RQHNQNLETP ESDHSTKMNM  180
INGSILEENQ RRFVVGSRQF MGIGREKDHE VLHSSLEGRS QNCASGSPQN EIVESMECKS  240
TIISPTGLIN NNKRPPSDST DDDHHQDHDQ GRRGQVLPGR KWVPNKVGRF NNGTASPGAC  300
RENNSNNINN DQHEDPQASE TMSMIRKARV SVRARSDASM ISDGCQWRKY GQKMAKGNPC  360
PRAYYRCTMA TGCPVRKQVQ RCADDRSILT TTYEGHHNHP LPPAAMAMAS TTSAAASMLL  420
SGSMPSGDHP HHHHHQGLNF LPRTAHLPAA CSASLATLSA SAPFPTVTLD LTRTPTSSSD  480
QAILGQRPPF SQGGDNVNSV SLPQILSQNV MSSPQVFGSK SLGLHNQGLL LNSSNPHDLV  540
ASETVSAATA AAITADPNFT AALVAAITSI IGNVKSNNNN TSSVTTRNGS EKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	6e-57	WRKY family protein