PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON90111.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | ERF | ||||||||
Protein Properties | Length: 222aa MW: 24971 Da PI: 9.2661 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.8 | 6.4e-19 | 5 | 55 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr+++ +g+Wv+eIr+p +r++lg+f tae+Aa+a+++a+ + g PON90111.1 5 KKFRGVRRRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEDAARAYDEAAIMMSG 55 59*****998.**********8.....334**********************98866 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MIQPKKFRGV RRRHWGSWVS EIRHPLLKRR VWLGTFETAE DAARAYDEAA IMMSGRNAKT 60 NFPIKPNQIN MANNNNSNMN NGTKNKMGAA TSSFSAILGE KLRKCCKSIP SPSLTCLRLD 120 TENSHIGVWQ KRAGTRSGSN WVMMVQLAGN TNNINTITNG NYKDDHHDHN NQLQPQEIPG 180 DHDHNHDHQV QPAGPEGGRN IGLEEEEKVA LQMIEELLNS NN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 5e-61 | ERF family protein |