PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON85346.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family MYB_related
Protein Properties Length: 78aa    MW: 9119.96 Da    PI: 4.5432
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON85346.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.79.7e-123172346
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      ++++E+ l+++  ++ G + W++Ia +++ gRt++q+  +w++
       PON85346.1 31 QFSEDEETLIIRMYNLVGER-WSLIAGRIP-GRTAEQIEKYWHS 72
                     69******************.*********.***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    
MADSRRSSSD DNFAHSTEIN REEPRNEVEV QFSEDEETLI IRMYNLVGER WSLIAGRIPG  60
RTAEQIEKYW HSTCKSES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.13e-18MYB_related family protein