PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON84169.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WOX
Protein Properties Length: 264aa    MW: 30540.3 Da    PI: 9.167
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON84169.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.53.5e-21968357
                --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                +R+++t+eql +Lee+++  +r+p+a+++++++++l    +++ ++V++WFqN++a++++
  PON84169.1  9 SRWCPTPEQLMILEEMYRAgTRTPNASQIQQITAHLsfygKIEGKNVFYWFQNHKARDRQ 68
                8*****************99*************************************996 PP
2Wus_type_Homeobox120.37.9e-39769264
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       +++RW+PtpeQ++iLee+y++G+rtPn+++iq+ita+L+ yGkie+kNVfyWFQN+kaR+rqk
         PON84169.1  7 SSSRWCPTPEQLMILEEMYRAGTRTPNASQIQQITAHLSFYGKIEGKNVFYWFQNHKARDRQK 69
                       689***********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MCPAANSSSR WCPTPEQLMI LEEMYRAGTR TPNASQIQQI TAHLSFYGKI EGKNVFYWFQ  60
NHKARDRQKL RRKLYKQLQQ QQLAAYHHHH QQLMTTTNST TSYNHNNNFT NNTQKHHSHF  120
LGYNSINHQF PASASSSHFH QQLTCYNSSI SAGSIPQVGV DQDHAPTHQL LNYTWKVEIP  180
ADHHHHHQSR IEINESPMMR MYDRDWMMIM DQVGPPHSPA RCSKPLKTLE LFPITATNLK  240
EECTSRSSNM LHLPCSSPAT NQKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.11e-35WOX family protein