PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON83272.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 376aa    MW: 40839.2 Da    PI: 4.7899
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON83272.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24e-1881131155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr++  +g+Wv+eIr+p   + r  r +lg+f ta eAa a+++a+++++g
  PON83272.1  81 CNYRGVRQRT-WGKWVSEIREP---N-RgNRLWLGTFPTALEAALAYDEAARAMYG 131
                 56*****999.**********8...2.359***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MGALDQGINM TSLPFNSTRK RKTRSRRDGG ASVAETLAKW KEYYNRIEST NDDGKPTRRV  60
PAKGSKKGCM KGKGGPDNSR CNYRGVRQRT WGKWVSEIRE PNRGNRLWLG TFPTALEAAL  120
AYDEAARAMY GPGARLNLPN ITDYSSLKES EKDCSSVATP PSGSSSVATP AGSDSTTTSN  180
SNLSEVCAEE ESKGKPVASN VKNESIKGES SIKPALSPVA EVAKPVSSVK AEAKADVTSQ  240
LAKMETKHEP MDTEYETCDN LGDAGEDYLQ NFSMDEMFDV DELLGLMDGN PGSMEGFGCI  300
GGQSYKDNHQ SEKPSNLSYQ LENPDAKLLG SLCHMEQAPS GLDYSFDFLK PGRQEDNGVC  360
IDDQGYFDIA ITDYGF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11823TRKRKT
22128RKTRSRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.18e-47ERF family protein