PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON82096.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 254aa MW: 29179.2 Da PI: 8.8724 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.7 | 1.7e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+ rqvtfskRr g+lKKA+E+SvLCda+va+i+fs++gkl+e+ss PON82096.1 9 KRIENKISRQVTFSKRRSGLLKKAHEISVLCDADVALIVFSNKGKLFEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 96.7 | 3.6e-32 | 84 | 175 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +e++++s++ e+ kL +ie Lqr++R+ lGedL++L+l+eLq++eqq++ +lk++R++Kn+l+ e i+e+qkk k+lqeen+ ++kkl+e PON82096.1 84 SSESQESSWCLEFPKLTTRIEVLQRNLRNCLGEDLDPLNLRELQNIEQQIDVGLKRVRTRKNQLMNETISEMQKKAKALQEENNLISKKLKE 175 7899999**********************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MGRGRVELKR IENKISRQVT FSKRRSGLLK KAHEISVLCD ADVALIVFSN KGKLFEFSSE 60 SSMETILERY DRHSHAQRQL VPTSSESQES SWCLEFPKLT TRIEVLQRNL RNCLGEDLDP 120 LNLRELQNIE QQIDVGLKRV RTRKNQLMNE TISEMQKKAK ALQEENNLIS KKLKENENTL 180 ADQSTNWDQQ VNITSPNTST LVLLAPPPRT RSLPSLTIGG TFQEKEMTEE DSEIQAQPAT 240 NISIPPWMLR HLNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26310.1 | 2e-85 | MIKC_MADS family protein |