PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON81725.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 272aa    MW: 30907.9 Da    PI: 5.7801
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON81725.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.37.7e-18127178256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y GVr+++ +g+++AeIrd + ng   r++lg+f++ae Aa a+++a+ +++g+
  PON81725.1 127 SYIGVRRRP-WGKFAAEIRDSTRNG--HRVWLGTFDSAESAALAYDQAAFSMRGA 178
                 599******.**********44465..*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MDFSDLFDLD QNLEFSLRSF SRDIDDDHHD PHKFHKDSPL SFDLVDHNQS PQTDSPTPSL  60
SSPVPSTYNN RTTKSQESEK QSPTADDEDD QEEQNSHGHD DHDPKEKIMM MTSTTSSTSQ  120
AKKKEKSYIG VRRRPWGKFA AEIRDSTRNG HRVWLGTFDS AESAALAYDQ AAFSMRGAAA  180
VLNFPIERVR ESLQEIKFCD FNLGRSPAEA LKERHYDMRR KISKTDRKKK DHRLLKKSTS  240
TTSDMQLVLE DLGAEYLEQL LGSSSSSTSD PS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-50ERF family protein