PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON80378.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | NF-YC | ||||||||
Protein Properties | Length: 204aa MW: 23109.2 Da PI: 10.5771 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 45.9 | 1.2e-14 | 95 | 186 | 8 | 99 |
NF-YC 8 kqiekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 ++ e+++d k +++P+ r+++i+++++ +is ea l+ ka e f+ ++ ++ a + ++++l ++++v++ + +dfl d vp++ PON80378.1 95 EEFEEKEDAKMNRFPMERVRRIIRSEDSDMRISNEAVFLVNKATEKFLEKFCGEAYASAVKDRKKSLAYKHLSSVVNKRKRYDFLSDFVPEK 186 57899********************999999**********************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MASSKKSVSE KRSKETKTKK KPSKESTKKK ASKGSSAKRK NDKKKTTNGA VNEDEVPPTP 60 SSSSDSQAKV ENGVEVTQNG TSNKKPKKGK RERKEEFEEK EDAKMNRFPM ERVRRIIRSE 120 DSDMRISNEA VFLVNKATEK FLEKFCGEAY ASAVKDRKKS LAYKHLSSVV NKRKRYDFLS 180 DFVPEKIKAE DALAERKLLE PEAA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 157 | 175 | RKKSLAYKHLSSVVNKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07980.1 | 3e-34 | NF-YC family protein |