PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON73479.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 282aa    MW: 32322.5 Da    PI: 4.5625
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON73479.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.6e-19136185355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GVr ++ +g+++AeIrd + ng   r++lg+f+tae Aa a+++a+ +++g
  PON73479.1 136 YRGVRKRP-WGKYAAEIRDSTRNG--VRVWLGTFDTAEAAALAYDQAAFAMRG 185
                 9*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MDPYYYSSSF FPYPDSDHDR DQYFYSSDQS YLSPNNSLNS QLESMSWDSL LTNNLANDNQ  60
LPLPFNQNDT EEMLLYGVLA EPNISSSTTT STHNSVNKVD QEEVNSKSEE SYHDDDHHHQ  120
DHDDHDQMEM KEEISYRGVR KRPWGKYAAE IRDSTRNGVR VWLGTFDTAE AAALAYDQAA  180
FAMRGSLAVL NFPAEKVCQS LREMKYRIDE GCSPVLALKK RHSMKRKSLS RKMKKEMNNT  240
VNINVVDNQT TSFENVVVLE DLGAEYLEEL LSISEISPAS PW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.19e-44ERF family protein