PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON66489.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 370aa MW: 41513.1 Da PI: 8.141

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON66489.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.7	4.8e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl PON66489.1 14 KGPWSPEEDSKLKEYIEKHGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	40.7	5.3e-13	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ eEd ++ ++++ G++ W+ Ia+ ++ gRt++++k++w++ PON66489.1 69 GEFSDEEDRIICNLFANIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDSKLKEYIE KHGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSDEEDRIIC NLFANIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGL 120 VPPISQRKIP LPFPNSSHET TTTTTYNQPL LSSSSSLYRS FSSGLEHQMS NIILSSTYPN 180 PPTSSTTTTS SLNFQTQMQE KYLVGGTSTS TSTNNPIQYN YIPVKDNSIL VFGSDQGRSC 240 SSSSDGSCNQ ISYGGGCKEL KQGEQIMGFH HHHQGYNINM ANFNGFGEQM MINYENHHNV 300 WDQKSNGYFG ESSLEKYCVL GDENDHFKQL ISSSSSNSNN PSIINSYDSN NNYGYGNIDE 360 NKTQDKVMYF

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDSKLKEYIE KHGTGGNWIA LPQKAGLKRC GKSCRLRWLN  60
YLRPNIKHGE FSDEEDRIIC NLFANIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLMGL  120
VPPISQRKIP LPFPNSSHET TTTTTYNQPL LSSSSSLYRS FSSGLEHQMS NIILSSTYPN  180
PPTSSTTTTS SLNFQTQMQE KYLVGGTSTS TSTNNPIQYN YIPVKDNSIL VFGSDQGRSC  240
SSSSDGSCNQ ISYGGGCKEL KQGEQIMGFH HHHQGYNINM ANFNGFGEQM MINYENHHNV  300
WDQKSNGYFG ESSLEKYCVL GDENDHFKQL ISSSSSNSNN PSIINSYDSN NNYGYGNIDE  360
NKTQDKVMYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	9e-76	MYB family protein