PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON65105.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 359aa    MW: 39930.3 Da    PI: 4.608
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON65105.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.1e-19196246255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdps   k  r++lg+f ta eAaka+++a+ kl+g
  PON65105.1 196 HYRGVRQRP-WGKFAAEIRDPSR--KGSRVWLGTFETAIEAAKAYDRAAFKLRG 246
                 7********.**********854..34*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MANYLDEVSK LQLIKQHLLG DLSSPLSSNF SVELATRTEW SSDPNQACSS SQSDSLEISD  60
YLDTSSAELF EFSSGRISSQ TDCSGFEPKP EVVDLTSPKA LNLTSNNTCD DVNNSFEFES  120
KPQISKSSSF SFEFESKPQI APTKSTDSSS SSSSPTGRKR SLTISLPAKT QTQWIQFGPP  180
NPAPKPTVAM EEEKRHYRGV RQRPWGKFAA EIRDPSRKGS RVWLGTFETA IEAAKAYDRA  240
AFKLRGSKAI LNFPLEAGKS EEEVVVVKNV EVKRRRQEEE EEEEEEEEYE VKPEVTEKKA  300
KLTEADDSIN TLSYLNDIPL TPSNWTAVWD SDNKGIFSVP PLSPLSPHPS LGFPQLMVV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1273301KRRRQEEEEEEEEEEEYEVKPEVTEKKAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.16e-46ERF family protein